BBa_K2047006BBa_K2047006 Version 1 (Component)Stem-loop with free energy of -38.5kcal/mol measured by Mfold
BBa_K2047005BBa_K2047005 Version 1 (Component)Stem-loop with free energy of -30.1kcal/mol measured by Mfold
BBa_K2047004BBa_K2047004 Version 1 (Component)Stem-loop with free energy of -38.7kcal/mol measured by Mfold
BBa_K2047007BBa_K2047007 Version 1 (Component)Stem-loop with free energy of -34.4kcal/mol measured by Mfold
BBa_K2047008BBa_K2047008 Version 1 (Component)Stem-loop with free energy of -38.8kcal/mol measured by Mfold
BBa_K385005BBa_K385005 Version 1 (Component)B-box sequence encoding a regulatory mRNA stem loop
BBa_K2047012BBa_K2047012 Version 1 (Component)Stem loop with free energy of -44.9 measured by Mfold
BBa_K2047011BBa_K2047011 Version 1 (Component)Stem-loop with free energy of -51.4 kcal/mol, measured by Mfold
BBa_K2047010BBa_K2047010 Version 1 (Component)Stem loop with free energy of -38.8 kcal/mol measured by Mfold
BBa_K2047013BBa_K2047013 Version 1 (Component)Stem-loop with free energy of -10.0 kcal/mol measured by Mfold
BBa_K2047002BBa_K2047002 Version 1 (Component)Stem-loop with free energy of -14.9 kcal/mol measured by Mfold
BBa_K2047009BBa_K2047009 Version 1 (Component)Stem loop with free energy of -25.6 kcal/mol measured by Mfold
AraC_TEV-FBBa_K627008 Version 1 (Component)Fusion part of arabinose-inducible induction system and the TEV protease
BBa_J329040BBa_J329040 Version 1 (Component)luxIR QS System with B0034 RBSs and LVA-tagged GFP
BBa_J119309BBa_J119309 Version 1 (Component)pSB1A2-BR-HS-G-RNA-I
BBa_K726009BBa_K726009 Version 1 (Component)T7 driven lac operated inducer for the rhl quorum-sensing system
BBa_M36561BBa_M36561 Version 1 (Component)This terminator is a general terminator of transcription. It forms a stem loop which stops transcrip
iGEM Parts Registryigem_collection Version 1 (Collection)The iGEM Registry is a growing collection of genetic parts that can be mixed and matched to build synthetic biology devices and systems. As part of the synthetic biology community's efforts to make biology easier to engineer, it provides a source of genetic parts to iGEM teams and academic labs.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SEGASEGA_collection Version 1 (Collection)In the Standardized Genome Architecture (SEGA), genomic integration of DNA fragments is enabled by λ-Red recombineering and so-called landing pads that are a common concept in synthetic biology and typically contain features that i) enable insertion of additional genetic elements and ii) provide well-characterized functional parts such as promoters and genes, and iii) provides insulation against genome context-dependent effects. The SEGA landing pads allow for reusable homology regions and time-efficient construction of parallel genetic designs with a minimal number of reagents and handling steps. SEGA bricks, typically synthetic DNA or PCR fragments, are integrated on the genome simply by combining the two reagents (i.e. competent cells and DNA), followed by incubation steps, and successful recombinants are identified by visual inspection on agar plates. The design of the SEGA standard was heavily influenced by the Standard European Vector Architecture (SEVA). SEGA landing pads typically hosts two major genetic “control elements” that influence gene expression on the transcriptional (C1), and translational (C2) level. Furthermore, landing pads contain gadgets such as selection and counterselection markers.