BBa_K809011BBa_K809011 Version 1 (Component)Dowstream recombination site of cox3
BBa_K1321370BBa_K1321370 Version 1 (Component)NiBP + Linker-CBDcipA-Linker
BBa_M36192BBa_M36192 Version 1 (Component)Bicistronic Linker Sequence
BBa_K1051207BBa_K1051207 Version 1 (Component)The degradation tag in E. coil ,M0051 with TAATAA.
BBa_K1051206BBa_K1051206 Version 1 (Component)The degradation tag in E. coil ,M0050 with TAATAA.
BBa_J52022BBa_J52022 Version 1 (Component)NfΚB-dnTraf6-linker-GFP
Excel2SBOLExcel2SBOL_collection Version 1 (Collection)A collection of sbol that is used for the excel2sbol library
BBa_M31541BBa_M31541 Version 1 (Component)This is the M13K07 genome refactored between the Hap1 and Bam1 Sites
His6BBa_K1362431 Version 1 (Component)N-terminal His6 (C-Intein)
BBa_K112212BBa_K112212 Version 1 (Component){rbs.int!} The integrase gene with native rbs site and stop codon, BBb format
BBa_J24684BBa_J24684 Version 1 (Component)5. M RBS - LacI
BBa_K2012000BBa_K2012000 Version 1 (Component)c-di-GMP tandem riboswitche bc3-5
BBa_J61117BBa_J61117 Version 1 (Component)Ribosome Binding Site Family Member
BBa_K855006BBa_K855006 Version 1 (Component)pvdQ gene with a silent mutation at 1494 bp to remove the internal PstI site
BBa_K855005BBa_K855005 Version 1 (Component)pvdQ gene with a silent mutation at 1491 bp to remove the internal PstI site
BBa_I737007BBa_I737007 Version 1 (Component)Constitutive expression of all the accessory parts needed for our plasmid
BBa_M36729BBa_M36729 Version 1 (Component)EfeU elemental iron (II) transporter + 5' UTR (medium) + terminator
BBa_K404107BBa_K404107 Version 1 (Component)Beta-Globin-Intron
Intein_assisted_Bisection_MappingIntein_assisted_Bisection_Mapping_collection Version 1 (Collection)Split inteins are powerful tools for seamless ligation of synthetic split proteins. Yet, their use remains limited because the already intricate split site identification problem is often complicated by the requirement of extein junction sequences. To address this, we augmented a mini-Mu transposon-based screening approach and devised the intein-assisted bisection mapping (IBM) method. IBM robustly revealed clusters of split sites on five proteins, converting them into AND or NAND logic gates. We further showed that the use of inteins expands functional sequence space for splitting a protein. We also demonstrated the utility of our approach over rational inference of split sites from secondary structure alignment of homologous proteins. Furthermore, the intein inserted at an identified site could be engineered by the transposon again to become partially chemically inducible, and to some extent enabled post-translational tuning on host protein function. Our work offers a generalizable and systematic route towards creating split protein-intein fusions and conditional inteins for protein activity control.
BBa_I766216BBa_I766216 Version 1 (Component)Combinatorial Cloning B Site
BBa_J580003BBa_J580003 Version 1 (Component)Cate and Arnau testing the registry
BindingBBa_K1378007 Version 1 (Component)INPNC-MVN & GFP (the Binding Plasmid)
BBa_K106017BBa_K106017 Version 1 (Component)AarI "D" site scar sequence
BBa_K1583012BBa_K1583012 Version 1 (Component)Linker in fusion protein
R5BBa_K1442103 Version 1 (Component)Reverse 5
BBa_K1963002BBa_K1963002 Version 1 (Component)A template for expression of sRNA fusions to the E. coli micC hairpin
BBa_K812012BBa_K812012 Version 1 (Component)OsTirI Ubiquitinase E3 for AID tagged protein degradation in the presence of auxin
SBOL Compliant SoftwareSBOLCompliantSoftware_collection Version 1 (Collection)A collection of software that supports the Synthetic Biology Open Language (SBOL) standard
BBa_K1486003BBa_K1486003 Version 1 (Component)Flexible linker 2x (GGGS)
BBa_K1778000BBa_K1778000 Version 1 (Component)CYC1TATA sequence is derived from the TATA box secific sequence of yeast Saccharomyces cerevisiae
BBa_J52223BBa_J52223 Version 1 (Component)rluc-linker-PEST191
BBa_K323084BBa_K323084 Version 1 (Component)linker sequence [GGSGGGSGGS]
Gata3-5BBa_I745010 Version 1 (Component)Gata3-5
BBa_K300084BBa_K300084 Version 1 (Component)Phasins with intein downstream (separated by a flexible protein domain linker)
BBa_M36745BBa_M36745 Version 1 (Component)The sensor codes for AraC, a transcription factor, which represses the operon.Arabinose induces tran
GeBBBa_K411102 Version 1 (Component)GFP_split_B + Linker + eIF4A_split_B
TALE3BBa_K1861701 Version 1 (Component)TALE that binds the sequence T CCGACTCGCTGT
TALE1BBa_K1861501 Version 1 (Component)TALE that binds the sequence T CTCCACCCCATT
TALE2BBa_K1861601 Version 1 (Component)TALE that binds the sequence T GTCGTAACAACT
BBa_K390056BBa_K390056 Version 1 (Component)sigE promoter, 5'UTR, and RBS with GFP
BBa_M36001BBa_M36001 Version 1 (Component)5' Bicistronic UTR (medium), does not include ATG start
c-di-AMPBBa_K1045002 Version 1 (Component)CFP Reporter under control of the c-di-AMP-dependent YdaO Riboswitch
BBa_K2122000BBa_K2122000 Version 1 (Component)Device expressing the Gb3 Synthase enzyme under control of an arabinose inducible promoter
BBa_K1051205BBa_K1051205 Version 1 (Component)The RFP with degradation tag
BBa_K1316011BBa_K1316011 Version 1 (Component)pFAB640 regulating the ccmAH cluster