SynBioHub

Public

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

RFP-BA-Bbs
BBa_K349003 Version 1 (Component)
RFP-BA-BbsI (for construction of BA BioBytes 2.0)

Public

kanB
BBa_K349301 Version 1 (Component)
kanR-BA (BioBytes 2.0)

Public

kanR
BBa_P1003 Version 1 (Component)
kanamycin resistance cassette

Public

Kan-BA-Bbs
BBa_K349010 Version 1 (Component)
KanR-BA-BbsI (for construction of BA BioBytes 2.0)

Public

KanR-BA-Bf
BBa_K349012 Version 1 (Component)
KanR-BA-BfuAI (for construction of BA BioBytes 2.0)

Public

ampR-BA
BBa_K349302 Version 1 (Component)
ampR-BA (BioBytes 2.0)

Public

tetR-BA
BBa_K349303 Version 1 (Component)
tetR-BA (BioBytes 2.0)

Public

kanA
BBa_K349115 Version 1 (Component)
kanR-AB (BioBytes 2.0)

Public

RFP-BA-Bsa
BBa_K349002 Version 1 (Component)
RFP-BA-BsaI (for construction of BA BioBytes 2.0)

Public

BBa_K132000
BBa_K132000 Version 1 (Component)
RBS+kanR+LVA

Public

KanR-AB-Bf
BBa_K349011 Version 1 (Component)
KanR-AB-BfuAI (for construction of AB BioBytes 2.0)

Public

KanR-AB-Bb
BBa_K349009 Version 1 (Component)
KanR-AB-BbsI (for construction of AB BioBytes 2.0)

Public

vioA-AB
BBa_K349109 Version 1 (Component)
vioA-AB (BioBytes 2.0)

Public

crtI-AB
BBa_K349104 Version 1 (Component)
crtI-AB (BioBytes 2.0)

Public

crtY-AB
BBa_K349103 Version 1 (Component)
crtY-AB (BioBytes 2.0)

Public

lacI-AB
BBa_K349107 Version 1 (Component)
lacI-AB (BioBytes 2.0)

Public

lambdaCI-A
BBa_K349108 Version 1 (Component)
lambdaCI-AB (BioBytes 2.0)

Public

chlorR-AB
BBa_K349118 Version 1 (Component)
chlorR-AB (BioBytes 2.0)

Public

CFP-AB
BBa_K349113 Version 1 (Component)
CFP-AB (BioBytes 2.0)

Public

BBa_K349119
BBa_K349119 Version 1 (Component)
mWasabi-AB (BioBytes 2.0)

Public

vioD-AB
BBa_K349111 Version 1 (Component)
vioD-AB (BioBytes 2.0)

Public

ampR-AB
BBa_K349116 Version 1 (Component)
ampR-AB (BioBytes 2.0)

Public

nRFP-AB
BBa_K349114 Version 1 (Component)
nRFP-AB (BioBytes 2.0)

Public

tetA
BBa_K349117 Version 1 (Component)
tetR-AB (BioBytes 2.0)

Public

crtE-AB
BBa_K349101 Version 1 (Component)
crtE-AB (BioBytes 2.0)

Public

tetrep-AB
BBa_K349106 Version 1 (Component)
tet_rep-AB (BioBytes 2.0)

Public

crtB-AB
BBa_K349102 Version 1 (Component)
crtB-AB (BioBytes 2.0)

Public

vioB-AB
BBa_K349110 Version 1 (Component)
vioB-AB (BioBytes 2.0)

Public

vioE-AB
BBa_K349112 Version 1 (Component)
vioE-AB (BioBytes 2.0)

Public

araC-AB
BBa_K349105 Version 1 (Component)
araC-AB (BioBytes 2.0)

Public

KanR
BBa_J31003 Version 1 (Component)
kanamycin resistance forward (KanF) [cf. BBa_J23012 & BBa_J31002]

Public

KanR-BA-Bs
BBa_K349008 Version 1 (Component)
KanR-BA-BsaI (for construction of BA BioBytes 2.0)

Public

BBa_K1321005
BBa_K1321005 Version 1 (Component)
Synthetic Phytochelatin EC(20) RFC[25]

Public

BBa_K1172904
BBa_K1172904 Version 1 (Component)
Rnase Ba (Barnase) from Bacillus amyloliquefaciens

Public

BBa_K329051
BBa_K329051 Version 1 (Component)
[KanR + LacZ] cassette

Public

BBa_K1795024
BBa_K1795024 Version 1 (Component)
KanR Operon under R0010

Public

RFP-AB-Bfu
BBa_K349005 Version 1 (Component)
RFP-AB-BfuAI (for construction of AB BioBytes 2.0)

Public

RFP-AB-Bsa
BBa_K349001 Version 1 (Component)
RFP-AB-BsaI (for construction of AB BioBytes 2.0)

Public

KanR
BBa_P1007 Version 1 (Component)
kanamycin resistance cassette

Public

RFP-BA-Bfu
BBa_K349006 Version 1 (Component)
RFP-BA-BfuAI (for construction of BA BioBytes 2.0)

Public

BBa_K132007
BBa_K132007 Version 1 (Component)
kanR-LVA+lacI+PL+kanR-LVA

Public

BBa_K567020
BBa_K567020 Version 1 (Component)
KanR

Public

IBMc090
IBMc090 Version 1 (Component)
pTHSSd_1V-WTR1R2-BbsI(G)-kanR-lacZalpha-SapI-WTR1R2

Public

BBa_K1995012
BBa_K1995012 Version 1 (Component)
BA (merA coding sequence)

Public

BBa_K132008
BBa_K132008 Version 1 (Component)
kanR-LVA+lacI+PL+kanR-LVA+aiiA+terminator

Public

BBa_K132017
BBa_K132017 Version 1 (Component)
luxI+kanR-LVA+lacI+PL+kanR-LVA+aiiA+terminator

Public

kanR
BBa_K389005 Version 1 (Component)
Kanamycin resistance

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