BBa_J100181

BBa_J100181 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_J100181
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Paige Farrar
Date created: 2014-09-10 11:00:00
Date modified: 2015-08-31 04:08:23

soxS promoter



Types
DnaRegion

Roles
Regulatory

promoter

Sequences BBa_J100181_sequence (Version 1)

Description

Under superoxide stress, the SoxR protein is activated. This triggers the transcription of a second regulatory gene, soxS, when its base sequence is fully intact. The function of this process is to activate superoxide stress genes in Escherichia coli. When soxS is artificially shortened, however, the binding of the SoxR protein turns the promoter off, making it repressible. In this experiment, the absence of the SoxR protein under chemical conditions should allow the shortened soxS promoter to remain active.

Hidalgo & Demple. "Spacing of promoter elements regulates the basal expression of the soxS gene and converts SoxR from a transcriptional activator into a repressor." The EMBO Journal. Vol. 16 No. 5 pp. 1056-1065. (1997)

Shin, Singh, Cheon, & Roe. "Activation of the SoxR Regulon in Streptomyces coelicolor by the Extracellular Form of the Pigmented Antibiotic Actinorhodin." Journal of Bacteriology. p. 75-81 (Jan. 2011)

Notes

There's no Bsa I site in this promoter.

Source

The soxS gene

Sequence Annotation Location Component / Role(s)
-35
-10
20,25
45,50
feature/binding non_covalent_binding_site
non_covalent_binding_site feature/binding
igem#sampleStatus
Not in stock
igem#status
Unavailable
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_J100181/1