BBa_K1383000

BBa_K1383000 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K1383000
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Rachit Jain
Date created: 2014-10-01 11:00:00
Date modified: 2015-05-08 01:10:13

BBa_K1383000 (mCherry- Native RBS)



Types
DnaRegion

Roles
Composite

engineered_region

Sequences BBa_K1383000_sequence (Version 1)

Description

In an effort to expand synthetic biology research for Archaea, we have developed protein expression tools to facilitate fluorescence mediated detection of proteins. For our 2014 project we present 3 new BioBrick parts that iGEMers can use readily. All three of our parts are BioBrick compatible. Specifically, we constructed tools consisting of native/ synthetic Methanococcus RBS site(s) upstream of a gene encoding red fluorescent protein-mCherry. Prior to cloning the mCherry gene was codon optimized for expression in Methanoccocus (also, ensuring BioBrick compatibility in the design considerations).
The BioBrick part- BBa_K1383000 consists of the native Methanococcus RBS site upstream of the mCherry gene. This fragment was inserted into pSB1C3 plasmid backbone using EcoRI and PstI restriction enzymes.

Notes

We have ensured Bio Brick Compatibility for all our parts.

Source

The native RBS sequence was obtained from Methanococcus maripaludis.
The mCherry gene was obtained from Clonentech (Discosoma sp.)and was then codon optimized for expression in Methanococcus.

Sequence Annotation Location Component / Role(s)
Promoter
Native RBS
mCherry
2,175
185,190
196,906
feature/promoter promoter
feature/rbs ribosome_entry_site
feature/protein CDS
igem#experience
None
 
igem#sampleStatus
In stock
igem#status
Available
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K1383000/1