Source:
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Shuyan Tang
Date created: 2015-09-06 11:00:00
Date modified: 2015-09-18 09:34:57
LIP prepro + E. coli ribosomal protein L2 (61-273aa) + YLcwp3 Fusion
| Types | DnaRegion |
| Roles | CDS Coding |
| Sequences | BBa_K1592011_sequence (Version 1) |
Description
__NOTOC__This is the cell display system of Yarrowia lipolytica, composed of LIP prepro, interest protein, and YLcwp3.LIP prepro is signal peptide used to secrete the interest protein out of the cell, and the YLcwp3 is the anchor domain binding the interest protein to the cell wall of yeast.We use this system to display silica-tag and test its binding characteristics.
Here we use this system to display Silica-tag on cell wall of Yarrowia lipolytica to binding the silica.
E.coli ribosomal protein L2 was found to bind tightly to silicon particles, which have surfaces that are oxidized to silica. This L2 silica-binding tag, called the 'Si-tag', can be used for one-step targeting of functional proteins on silica surfaces. The silica-binding domains of E. coli L2 was mapped to amino acids 1???60, 61-202 and 203???273, called Si-tag1, Si-tag2 and Si-tag3. We respectively test the silica-binding characteristics of this three regions and their combinations.
Notes
In order to replace the domains more conveniently, we respectivey added BamHI, SalI, NdeI between LIP2 prepro, E. coli ribosomal protein L2, GS linker and YLcwp3Source
E. coli ribosomal protein L2 was synthesized by IDT, LIP2 prepro and YLcwp3 were cloning from the plasmid JMP62, and we fused this three sequences.| Sequence Annotation | Location | Component / Role(s) |
| LIP2 prepro BamHI Si-tag 23 SalI GS Likner NdeI YLcwp3 | 1,99 100,105 106,747 748,753 754,798 799,804 805,1170 | CDS feature/protein feature/misc sequence_feature CDS feature/protein feature/misc sequence_feature tag feature/tag sequence_feature feature/misc CDS feature/protein |