BBa_K2013007

BBa_K2013007 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K2013007
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Demin Xu
Date created: 2016-10-11 11:00:00
Date modified: 2016-10-15 08:11:46

TPA binding receptor



Types
DnaRegion

Roles
Translational_Unit

engineered_region

Sequences BBa_K2013007_sequence (Version 1)

Description

This part contains the sequence that codes terephthalic acid(TPA)binding receptor in the Periplasmic.In addition,We carried out codon optimization on this part.


Experimental Validation


This part is validated through Four ways: amplification, PCR, Enzyme cutting and Sequence.

Amplification


Enzyme:KOD


Primer-F:5′-GAATTCGCGGCCGCTTCTAGAGTACTAGAGTCACACAGGAGAGTACTAGATG-3′


Primer-R:5′- CGCTACTAGTATTATTAATCCAGACGAACGTTCGCG-3′


Results



PCR


Enzyme:Taq


Primer-F:5′-CCACCTGACGTCTAAGAAAC-3′


Primer-R:5′-GTATTACCGCCTTTGAGTGA-3′


Results


Double digestion


After the assembly ,the plasmid was transferred into the Competent E. coli top10. After culturing overnight in LB,we minipreped the plasmid for double digestion .The first cutting procedure was performed with EcoRI and EcoRV restriction endonuclease. The second cutting procedure was performed with PstI and NcoI restriction endonuclease.The plasmid was cutted in a 25μL system at 37 ℃ for 1 hours. The Electrophoresis was performed on a 1% Agarose glu.


Results

Notes

This is a Translational units part that relates to encode TPA binding receptor

Source

This sequence is from a bacterium called Ideonella sakaiensis 201-F6

Sequence Annotation Location Component / Role(s)
RBS
ISF6_0226
1,13
20,991
feature/rbs ribosome_entry_site
CDS feature/protein
igem#experience
None
 
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K2013007/1