U6

BBa_K2080000 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K2080000
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Haojian Li
Date created: 2016-09-17 11:00:00
Date modified: 2016-09-22 07:47:06

sgRNA generator



Types
DnaRegion

Roles
Generator

engineered_region

Sequences BBa_K2080000_sequence (Version 1)

Description

Guide RNA is a hundred base-long molecule with a dCas9-VP64 scaffold sequence, which can guide dCas9-VP64 to its complementary part of a double-strand DNA. In our project, this gRNA is targeting to the promoter of bax, a proapoptosis protein, which can activate the transcription of bax.

Notes

We design the sequence of the gRNA that is complementary to the bax promoter region, and try to get closer to the transcription start site to obtain higher activation of bax trascription.

Source

BBa_K1179015

Sequence Annotation Location Component / Role(s)
U6 promoter
gRNA scaffold
1,265
266,365
promoter feature/promoter
sequence_feature feature/misc
igem#experience
None
 
igem#sampleStatus
It's complicated
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K2080000/1