BBa_K2110004

BBa_K2110004 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K2110004
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Le He
Date created: 2016-10-04 11:00:00
Date modified: 2016-10-05 11:21:26

D-alanyl-D-alanine dipeptidase gene



Types
DnaRegion

Roles
CDS

Coding

Sequences BBa_K2110004_sequence (Version 1)

Description

Peptidoglycan is the major constituent of cell wall of bacterial like E.coli. The D-alanyl-D-alanine dipeptidase gene (ddpX) exists in the genome of E.coli. The counterpart of ddpX, VanX, which has the same effect as ddpX, exists in many gram-positive bacterial like Enterococcus faecalis and Streptomyces toyocaensis because they need it to hydrolyze the D-Ala-D-Ala and transfer the D-Ala-D-Ala residue of peptidoglycan to D-Ala-D-Lac residue so that the antibiotic vancomycin cannot combine the peptidoglycan to cause the destruction of cell wall. However, in gram-negative bacterial like E.coli, which own the robust outer membrane that can resist the vancomycin, the hydrolase ddpX with the same effects also exists. This is strange because the gram-negative bacterial have no necessity to own this kind of seemly dangerous hydrolase. Actually the ddpX in E.coli has another vital use when they are under starvation conditions. The ddpX can hydrolyze the D-Ala-D-Ala in their cell wall to produce the D-Ala as the carbon source to maintain their life. This mechanism is only carried out when they are under starvation conditions. If the ddpX gene is overexpressed, the cell wall will be damaged and cell lysis will occur.

Notes

Enhanced promoter is required

Source

It comes from the genome of E.coli

Sequence Annotation Location Component / Role(s)
BioBrick
1,582
feature/BioBrick engineered_region
igem#experience
Works
 
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K2110004/1