Source:
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: James DiCarlo
Date created: 2009-10-19 11:00:00
Date modified: 2015-05-08 01:11:46
3L.3_23.A2.14
| Types | DnaRegion |
| Roles | sequence_feature Other |
| Sequences | BBa_K277026_sequence (Version 1) |
Description
3L.3_23.A2.14 is 750 bases long and is cloned into the pGem-T vector.3L.3_23.A2.14 was designed as a piece of synthetic chromosome 3 with the goal of minimizing and stabilizing that chromosome and to that end has had any tRNAs, introns, repeat regions, and transposons that were present in the wildtype chromosome removed. In addition a very few gene sequences were slightly recoded to add or remove restriction enzyme recognition sites to facilitate assembly; most gene sequences were slightly recoded to introduce unique primers for diagnostic PCR amplification, and some gene sequences were slightly recoded to address the distribution of stop codon usage. 3L.3_23.A2.14 is a constituent of 3L.3_23.A2 (along with 3L.3_23.A2.01, 3L.3_23.A2.02, 3L.3_23.A2.03, 3L.3_23.A2.04, 3L.3_23.A2.05, 3L.3_23.A2.06, 3L.3_23.A2.07, 3L.3_23.A2.08, 3L.3_23.A2.09, 3L.3_23.A2.10, 3L.3_23.A2.11, 3L.3_23.A2.12, and 3L.3_23.A2.13.)
This part contains at least part of the following features (positions offset from first base of sequence):
kind and name offset notes
reverse_primer YCL055W_tagr1v1 (402..429)
loxP_site loxPsym_YCL055W (685..718)
gene YCL055W (-326..681) Transcription factor required for induction of KAR3 and CIK1 during mating%2C also required during meiosis%3B exists in two forms%2C a slower-migrating form more abundant during vegetative growth and a faster-migrating form induced by pheromone
Sequence (the first 750 bases correspond to coordinates 18425..19174 in synthetic chromosome yeast_chr3_3_23)