BBa_K337011

BBa_K337011 Version 1

Component

Source: http://parts.igem.org/Part:BBa_K337011

Generated By: https://synbiohub.org/public/igem/igem2sbol/1

Created by: Adlung L,Al Sabah J,Bayer P,Berrens R,Cristiano E,Flocke L,Kleinsorg S,Kolodziejczyk A,Macias Torre A,Mathur A,Mayilo D,Neumann S,Niopek D,Pisa R,Schad J,Schuhmacher L,Uhlig T,Wu X,Grimm D,Eils R

Date created: 2010-10-20 11:00:00

Date modified: 2015-05-08 01:12:06

hsa-miR-221 Binding site pattern (2BS)

Details

• Types: DnaRegion
• Roles: promoter; Regulatory
• Sequences: BBa_K337011_sequence (Version 1)

Description

10L2

Notes

The spacer sequences, present between the miRNA binding sites, should have the lowest compatibility to known miRNAs, to minimize unspecific sequence recognition.

Source

http://mirbase.org/cgi-bin/mature.pl?mature_acc=MIMAT0000278

Sequence Annotations

Sequence Annotation	Location	Component / Role(s)
additional 10bp spacer	54,63	sequence_feature, feature/misc
Spacer 1st half	1,15	feature/misc, sequence_feature
Spacer 2nd half	39,53	sequence_feature, feature/misc
Spacer 1st half	64,78	sequence_feature, feature/misc
Spacer 2nd half	102,116	sequence_feature, feature/misc

Other Properties

• igem#experience: None
• igem#sampleStatus: It's complicated
• igem#status: Planning
• synbiohub#ownedBy: user/james
• synbiohub#ownedBy: user/myers
• synbiohub#topLevel: BBa_K337011/1

Member of these Collections

• iGEM Parts Registry