BBa_M33353

BBa_M33353 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_M33353
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Alejandro Virrueta
Date created: 2010-06-05 11:00:00
Date modified: 2015-05-08 01:14:02

CDS for TodT protein



Types
DnaRegion

Roles
CDS

Coding

Sequences BBa_M33353_sequence (Version 1)

Description

Pseudomonas putida possesses a two-component regulatory system (TCS) which can sense changes in the toluene level of the environment. TodS and TodT proteins control the expression of genes involved in the degradation of toluene, benzene, and ethylbenzene via the toluene dioxygenase pathway. In response to toluene and other aromatic hydrocarbons, the TodS/TodT TCS mediate a single promoter termed pTod, which transcribes the catabolic genes involved in the toluene dioxygenase pathway. TodT is phosphorylated by the protein kinase TodS, and it can also increase the autophosphorylation activity of TodS. Once TodT is activated, it binds to a site on the pTod promoter approximately 107 base pairs upstream from the RNA polymerase-binding site. DNA bending caused by integration host factor (IHF) enables contact between TodT and RNA polymerase, initiating transcription.
This part should be used in conjunction with BBa_M33351, the Ptod promoter, and BBa_M33350/BBa_M33352, the todS protein sequence.

Notes

Restriction sites for EcorI, XbaI, SpeI, and PstI were removed from the sequence.

Source

This is a genomic sequence from Pseudomonas putida. The was obtained from GenBank (Y18245.1; http://www.ncbi.nlm.nih.gov/nuccore/4914628).

Sequence Annotation Location Component / Role(s)
todT
1,684
feature/cds CDS
igem#experience
None
 
igem#sampleStatus
Not in stock
igem#status
Unavailable
 
rdf-schema#seeAlso
A5W4E2
 
rdf-schema#seeAlso
I7CA98
 
rdf-schema#seeAlso
Q3LWR6
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_M33353/1