BBa_M36042

BBa_M36042 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_M36042
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Tom McLaughlin
Date created: 2011-04-30 11:00:00
Date modified: 2015-05-08 01:14:02

EfeU elemental iron (II) transporter



Types
DnaRegion

Roles
CDS

Coding

Sequences BBa_M36042_sequence (Version 1)

Description

This is the reconstructed gene for the EfeU iron transporter. This gene is inactive in K-12 strain E. coli, but has been characterized in the Nissle 1917 strain. (Grobe, Scherer et al. PMID: 16987175.)

Notes

The sequence was conceptually reconstructed from the frame-shifted version. The Ecogene entry has an "N" for the nucleotide which is uncertain, but a comment in that entry says that the correct amino acid is likely glycine. Thus we chose N = G in the final sequence.

Source

From wild-type Nissle 1917 E. coli. The sequence came from the Ecogene entry EG13860.

Sequence Annotation Location Component / Role(s)
Start codon
REGLE motif
REGLE motif
Stop codon
Repaired frameshift (see notes)
1,3
28,42
385,399
829,831
106,106
feature/start start_codon
feature/tag tag
feature/tag tag
feature/stop stop_codon
feature/misc sequence_feature
igem#sampleStatus
Not in stock
igem#status
Unavailable
 
rdf-schema#seeAlso
Q3Z398
 
rdf-schema#seeAlso
Q8XAS8
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_M36042/1