BBa_Z0170

BBa_Z0170 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_Z0170
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Alex Mallet
Date created: 2006-06-20 11:00:00
Date modified: 2015-05-08 01:14:55

T7.2 gene 1, codon-shuffled



Types
DnaRegion

Roles
CDS

Coding

Sequences BBa_Z0170_sequence (Version 1)

Description

Encodes the same protein as T7.2 gene 1, with first 12 codons after start shuffled to reduce RBS-CDS secondary structure.

Notes

The nucleotide sequence of the first 12 AA after the start codon were codon-shuffled to minimize the predicted RNA secondary structure that is formed between the RBS assigned to this gene in the T7.2 design and the coding sequence. The predicted dG of the RBS-CDS junction is -0.01 kCal/mol.

Source

Based on gene 1 of T7.

Sequence Annotation Location Component / Role(s)
gttgac -> GTAGAT
S1 -35 site
gat -> GAC
S1 -10 site
S1 promoter startsite
aac..gac -> aat..gat
2497,2502
2498,2502
2518,2520
2520,2525
2532,2532
4,39
feature/s_mutation point_mutation
sequence_feature feature/misc
point_mutation feature/s_mutation
feature/promoter promoter
feature/promoter promoter
feature/s_mutation point_mutation
igem#sampleStatus
Not in stock
igem#status
Unavailable
 
rdf-schema#seeAlso
P00573
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_Z0170/1