SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_K404233
BBa_K404233 Version 1 (Component)
[AAV2]-Rep-VP123_P5-TATA-KO (ViralBrick-587KO-Z34C)

BBa_K404230
BBa_K404230 Version 1 (Component)
[AAV2]-Rep-VP123_P5-TATA-KO (ViralBrick-587KO-Empty)

BBa_K404231
BBa_K404231 Version 1 (Component)
[AAV2]-Rep-VP123_P5-TATA-KO (ViralBrick-587KO-His-Tag)

BBa_K404234
BBa_K404234 Version 1 (Component)
[AAV2]-Rep-VP123_P5-TATAless (ViralBrick-587KO-Z34C-Spacer)

BBa_K404228
BBa_K404228 Version 1 (Component)
[AAV2]-Rep-VP123_P5-TATA-KO (ViralBrick-587-BLA)

mCherry
BBa_J06504 Version 1 (Component)
monomeric RFP optimized for bacteria

BBa_K404221
BBa_K404221 Version 1 (Component)
[AAV2]-Rep-VP123_P5-TATA-KO (ViralBrick-453-BAP)

tetA(C)f
BBa_J31007 Version 1 (Component)
tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]

BBa_K404226
BBa_K404226 Version 1 (Component)
[AAV2]-Rep-VP123_P5-TATA-KO (ViralBrick-587-His-Tag)

BBa_K404224
BBa_K404224 Version 1 (Component)
[AAV2]-Rep-VP123_P5-TATAless (ViralBrick-453-Z34C)

BBa_K404232
BBa_K404232 Version 1 (Component)
[AAV2]-Rep-VP123_P5-TATAless (ViralBrick-587KO-RGD)

BBa_K404229
BBa_K404229 Version 1 (Component)
[AAV2]-Rep-VP123_P5-TATAless (ViralBrick-587KO-BAP)

BBa_K404255
BBa_K404255 Version 1 (Component)
pCMV_[AAV2]-VP123ex (ViralBrick-587KO-Z34C)

BBa_K404235
BBa_K404235 Version 1 (Component)
[AAV2]Rep-VP123_p5TATAless (ViralBrick 453 Z34C-587 HSPG-KO)

BBa_K404213
BBa_K404213 Version 1 (Component)
ViralBrick-587KO-Z34C

BBa_K404256
BBa_K404256 Version 1 (Component)
pCMV_[AAV2]-VP123ex (ViralBrick-587KO-Z34C-Spacer)

BBa_K404214
BBa_K404214 Version 1 (Component)
ViralBrick-587KO-Z34C-Spacer

BBa_K404227
BBa_K404227 Version 1 (Component)
[AAV2]-Rep-VP123_P5-TATAless (ViralBrick-587-RGD)

BBa_K404223
BBa_K404223 Version 1 (Component)
[AAV2]-Rep-VP123_p5-TATAless (ViralBrick-453-RGD)

BBa_K404225
BBa_K404225 Version 1 (Component)
[AAV2]-Rep-VP123_P5-TATAless (ViralBrick-587-BAP)

tetA(C)b
BBa_J31006 Version 1 (Component)
tetracycline resistance protein TetA(C) (backwards) [cf. BBa_J31007]

BBa_K404222
BBa_K404222 Version 1 (Component)
[AAV2]-Rep-VP123_P5-TATAless (ViralBrick-453-His-Tag)

BBa_K404151
BBa_K404151 Version 1 (Component)
[AAV2]-VP23 (ViralBrick-587KO-Empty)

BBa_K404244
BBa_K404244 Version 1 (Component)
pCMV_[AAV2]VP123 (ViralBrick-453-Z34C)

BBa_K404003
BBa_K404003 Version 1 (Component)
[AAV2]-Rep-VP123(ViralBrick-587KO-empty)_p5-TATAless

BBa_K404004
BBa_K404004 Version 1 (Component)
[AAV2]-Rep-VP13(ViralBrick-587KO-empty)_p5-TATAless

BBa_K404005
BBa_K404005 Version 1 (Component)
[AAV2]-Rep-VP23(ViralBrick-587KO-empty)_p5-TATAless

BBa_K404236
BBa_K404236 Version 1 (Component)
[AAV2]Rep-VP123_p5TATAless (ViralBrick 453 RGD-587 HSPG-KO)

BBa_K404252
BBa_K404252 Version 1 (Component)
pCMV_[AAV2]-VP123ex (ViralBrick-587KO-Empty)

BBa_K404165
BBa_K404165 Version 1 (Component)
pCMV_VP1up_NLS_mVenus_[AAV2]-VP23 (ViralBrick-587KO-Empty)

BBa_K404251
BBa_K404251 Version 1 (Component)
pCMV_[AAV2]-VP123ex (ViralBrick-587KO-BAP)

BBa_K404254
BBa_K404254 Version 1 (Component)
pCMV_[AAV2]-VP123ex (ViralBrick-587KO-RGD)

BBa_K404002
BBa_K404002 Version 1 (Component)
[AAV2]-Rep-VP123_p5-TATAless

RBS-RFP
BBa_K093005 Version 1 (Component)
RFP with RBS

BBa_K404159
BBa_K404159 Version 1 (Component)
pCMV_CFP_Middle-Linker_[AAV2]-VP23 (ViralBrick-587KO-Empty)

BBa_K404166
BBa_K404166 Version 1 (Component)
pCMV_VP1up_NLS_His-Tag_[AAV2]-VP23 (ViralBrick-587KO-Empty)

BBa_K404253
BBa_K404253 Version 1 (Component)
pCMV_[AAV2]-VP123ex (ViralBrick-587KO-His-Tag)

BBa_K404160
BBa_K404160 Version 1 (Component)
pCMV_His-Tag_Middle-Linker_[AAV2]-VP23 (ViralBrick-587KO-Empty)

BBa_K404164
BBa_K404164 Version 1 (Component)
pCMV_VP1up_NLS_Z-EGFR-1907_[AAV2]-VP23 (ViralBrick-587KO-Empty)

BBa_K404161
BBa_K404161 Version 1 (Component)
pCMV_DARPin-E01_Middle-Linker_[AAV2]-VP23 (ViralBrick-587KO-Empty)

BBa_K404154
BBa_K404154 Version 1 (Component)
pCMV_Z-EGFR-1907_[AAV2]-VP23 (ViralBrick-587KO-Empty)

BBa_K404204
BBa_K404204 Version 1 (Component)
ViralBrick-453-Z34C

BBa_K081014
BBa_K081014 Version 1 (Component)
RFP protein generator - PoPS->RFP

BBa_K404158
BBa_K404158 Version 1 (Component)
pCMV_Z-EGFR-1907_SEG-Linker_[AAV2]-VP23 (ViralBrick-587KO-Empty)

BBa_K404156
BBa_K404156 Version 1 (Component)
pCMV_Z-EGFR-1907_Middle-Linker_[AAV2]-VP23 (ViralBrick-587KO-Empty)