SynBioHub

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

BBa_J04500
BBa_J04500 Version 1 (Component)
IPTG inducible promoter with RBS

Public

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

LuxR
BBa_I0462 Version 1 (Component)
luxR Protein Generator

Public

BBa_Q04510
BBa_Q04510 Version 1 (Component)
QPI (B0034.C0051.B0015.R0051)

Public

GFP report
BBa_E0240 Version 1 (Component)
GFP generator

Public

tetR
BBa_Q04400 Version 1 (Component)
QPI (B0034.C0040.B0015.R0040)

Public

YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

Public

SEGA021
SEGA021 Version 1 (Component)
natural linear DNA.

Public

SEGA022
SEGA022 Version 1 (Component)
natural linear DNA.

Public

BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs

Public

BBa_I13902
BBa_I13902 Version 1 (Component)
Synchronized Brickilator Test Construct (I13201.Q04510.I0461)

Public

BBa_I13900
BBa_I13900 Version 1 (Component)
Synchronized Brickilator Test Construct (I13201.Q04400.I0461)

Public

GFP genera
BBa_E0840 Version 1 (Component)
GFP generator

Public

//test
test Version 1 (Collection)

Public

//test1
test1 Version 1 (Collection)

Public

BBa_I0466
BBa_I0466 Version 1 (Component)
RhlR Protein Generator

Public

BBa_I0460
BBa_I0460 Version 1 (Component)
aiiA Device (B0034.C0060.B0015)

Public

BBa_I13901
BBa_I13901 Version 1 (Component)
Synchronized Brickilator Test Construct (I13201.Q04400.I0461)

Public

BBa_E0430
BBa_E0430 Version 1 (Component)
EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)

Public

BBa_Q04530
BBa_Q04530 Version 1 (Component)
QPI (B0034.C0053.B0015.R0053)

Public

BBa_I13209
BBa_I13209 Version 1 (Component)
Relaxation Oscillator Test Construct (I13202.B0015.I0460)

Public

BBa_I13601
BBa_I13601 Version 1 (Component)
Lac operator with CFP reporter (without LVA tag) [R/Lc-]

Public

BBa_I13001
BBa_I13001 Version 1 (Component)
RBS B0030 w/ YFP (-LVA) TT

Public

BBa_I13020
BBa_I13020 Version 1 (Component)
QPI Test Construct Intermediate (Q04530.E0430)

Public

BBa_S03169
BBa_S03169 Version 1 (Component)
Q04510.I0461

Public

BBa_I13922
BBa_I13922 Version 1 (Component)
Ring Oscillator Synchronization Device (I13260.Q04510.I0461)

Public

cI
BBa_Q04511 Version 1 (Component)
QPI (B0034.C0051.B0015.R0065)

Public

LuxR/P
BBa_I13201 Version 1 (Component)
Natural Lux Promoter Preceded by LuxR

Public

BBa_I13019
BBa_I13019 Version 1 (Component)
QPI Test Construct Intermediate (Q04510.E0430)

Public

PEST
BBa_J176018 Version 1 (Component)
PEST

Public

lacI
BBa_Q04121 Version 1 (Component)
QPI (B0034.C0012.B0015.R0011)

Public

BBa_I13501
BBa_I13501 Version 1 (Component)
Screening plasmid intermediate

Public

BBa_S03181
BBa_S03181 Version 1 (Component)
I0461.R0040.I0462

Public

BBa_S01023
BBa_S01023 Version 1 (Component)
Q04510.Q04520

Public

BBa_J09855
BBa_J09855 Version 1 (Component)
Constitutive luxR device with pLuxR

Public

BBa_S03168
BBa_S03168 Version 1 (Component)
Q04400.I0461

Public

BBa_I13921
BBa_I13921 Version 1 (Component)
Ring Oscillator Synchronization Device (I13260.Q04400.I0461)

Public

BBa_S04617
BBa_S04617 Version 1 (Component)
K592006:Q04510

Public

BBa_K2066509
BBa_K2066509 Version 1 (Component)
sfGFP

Public

BBa_I13202
BBa_I13202 Version 1 (Component)
3OC<sub>6</sub>HSL Sender Controlled by Lac Repressible Promoter

Public

EYFP
BBa_E0034 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

Public

BBa_I13022
BBa_I13022 Version 1 (Component)
QPI Test Construct Intermediate (Q04400.E0430)

Public

BBa_I13535
BBa_I13535 Version 1 (Component)
Test construct for screening plasmid

Public

Spacer
Spacer Version 1 (Component)

Public

Coupling
Coupling Version 1 (Component)
Translational coupler

Public

BBa_K880005
BBa_K880005 Version 1 (Component)
Strong promoter, strong RBS combination for high expression levels of proteins

Public

BBa_J33207
BBa_J33207 Version 1 (Component)
lac promoter and lacZ

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