rhII

BBa_C0070 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_C0070
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Debra Lin, Srini Devadas, David Gray, Ronny Krashinsky, and Chris Zheng Liu, Boopers
Date created: 2004-01-26 12:00:00
Date modified: 2015-08-31 04:07:23

autoinducer synthetase for N-butyryl-HSL (BHL) and HHL



Types
DnaRegion

Roles
Coding

CDS

Sequences BBa_C0070_sequence (Version 1)

Description

Autoinducer synthesis protein that produces N-butyryl-HSL which binds to RhlR, obtained from Pseudomonas aeruginosa.

Notes

Editing Check (1/28/04)
(0) BB sites cleaned
(1) ATG
(2) TAATAA
(3) Blast checks out (i.e., it's RhlI)
(4) Codon changes OK (AA and tRNA usage)
(5) Chassis might have conflict (w/ native autoinducer system?)
(6) ssrA tag added
(7) barcode added
(8) Codon optimized for expression in enteric bacteria


2 silent point mutations have been included into the sequence at base 138 from A to G and at base 576 from G to C to remove internal EcoRI and PstI sites. Mutations were chosen to yield the same amino acid and codons of similar frequency in E. coli.

Source

P. aeruginosa PA3476

Sequence Annotation Location Component / Role(s)
Help:Barcodes
rhlL
LVA
643,667
1,603
604,636
feature/barcode engineered_tag
feature/cds CDS
tag feature/tag
igem#experience
None
 
igem#partStatus
Released HQ 2013
igem#sampleStatus
In stock
igem#status
Available
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_C0070/1