BBa_J04606

BBa_J04606 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_J04606
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Nicholas Cain, Davidson College
Date created: 2005-06-27 11:00:00
Date modified: 2015-08-31 04:08:14

Antiswitch repressing Biobrick coding sequence at the RBS ("Off" switch)



Types
DnaRegion

Roles
mature_transcript_region

RNA

Sequences BBa_J04606_sequence (Version 1)

Description

The presence of theophylline prevents translation of mRNA coding region directly downstream from any Biobrick that contains the BBa_B0034 RBS. This effect is the result of the antiswitch attaching to the B0034 RBS preceding the coding region. The absence of theophylline allows expression of the coding region as usual.

Notes

Transcription of the antiswitch is repressed in the presence of tetR. Also, the actual RBS sequence of BBa_B0034 is only 12 bp long; three additional base pairs comprise the total target sequence, and these additional 3 bp's correspond to the last three base pairs of the B0034 Biobrick Prefix, Xba I.

Source

Adaptation of antiswitch design "S1" by Bayer and Smolke; article available at http://www.nature.com/nbt/journal/v23/n3/full/nbt1069.html

Sequence Annotation Location Component / Role(s)
R0010 Promoter Region
Hammerhead Riobozyme #1
Antiswitch
Antisense Binding Sequence
Hammerhead Riobozyme #2
B0015 Terminator
1,54
55,107
108,181
108,122
182,232
233,360
promoter feature/promoter
feature/stem_loop stem_loop
feature/misc sequence_feature
feature/binding non_covalent_binding_site
feature/stem_loop stem_loop
feature/misc sequence_feature
igem#experience
Fails
 
igem#sampleStatus
It's complicated
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_J04606/1