Riboswitch

BBa_J04800 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_J04800
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Andrew Drysdale
Date created: 2005-09-14 11:00:00
Date modified: 2015-08-31 04:08:15

J04800 (RevAptRibo) contains a theophylline aptamer upstream of the RBS that should act as a riboswi



Types
DnaRegion

Roles
promoter

Regulatory

Sequences BBa_J04800_sequence (Version 1)

Description

Like J04700 and J04900, J04800 contains a promoter, a theophylline aptamer, an 8bp sequence and an RBS, in that order. On either end, J04800 uses strandard Biobrick ends. The aptamer sequence comes from {R. Jenison, S. Gill, A. Pardi, B. Polisky, Science 263, 1426 (1994)}. However, the aptamer sequence is in reverse nucleotide order, hence the name, ReverseAptamerRiboswitch (RevAptRibo). The aptamer portion of the mRNA transcript should alter shape when it binds theophylline. This change in shape may affect expression levels, which would make this a synthetic, theophylline-dependent riboswitch. The Biobrick ends allow for convenient ligation of the riboswitch to a gene of choice.

Sequence Annotation Location Component / Role(s)
R0010
theophylline apatmer
B0034
8bp
1,200
201,238
247,258
239,246
feature/promoter promoter
feature/misc sequence_feature
feature/rbs ribosome_entry_site
sequence_feature feature/misc
igem#sampleStatus
Not in stock
igem#status
Unavailable
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_J04800/1