BBa_K1160002

BBa_K1160002 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K1160002
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Yang Rongwu
Date created: 2013-09-13 11:00:00
Date modified: 2015-05-08 01:09:32

cas9 cleavage detector



Types
DnaRegion

Roles
plasmid

Plasmid

Sequences BBa_K1160002_sequence (Version 1)

Description

This plasmid is used to detect the site-specific cleavage activity conducted by Cas9 (BBa_K1160000) together with chimeric RNA (BBa_K1160001). This part contains a eGFP coding sequence that followed by the targeted sequence. (The targeted sequence is from the spacer sequence from E.coli str.K12, substr.W3110) Also, the targeted sequence is replaceable with the right restriction enzyme. If the cas9 protein authentically conduct the site-specific cleavage activity, this plasmid will be broken with a few nucleotides cut off from it. Thus the eGFP can not be expressed in the organism, which can be a detector of the cleavage.

Notes

to be added.

Source

eGFP (to be detemined),
The targeted sequence is from E.coli str.k12, substr.w3110.

Sequence Annotation Location Component / Role(s)
eGFP
target sequence
AmpR
BleoR
ori
624,1343
1344,1408
2229,3089
4382,4756
3260,3848
CDS feature/protein
sequence_feature feature/misc
feature/protein CDS
CDS feature/protein
sequence_feature feature/misc
igem#sampleStatus
It's complicated
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K1160002/1