LipA-HE

BBa_K143035 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K143035
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Qin Qi
Date created: 2008-09-17 11:00:00
Date modified: 2015-05-08 01:10:24

LipA-Human Elastin (EP20-24-24) Fusion Protein



Types
DnaRegion

Roles
CDS

Coding

Sequences BBa_K143035_sequence (Version 1)

Description

Elastin is a polymeric extracellular matrix protein found in tissues that require the ability to extend and recoil. Examples of elastin containing tissues include arteries, lungs, ligaments and skin.

Construct EP20-24-24 for human elastin polypeptide consists of distinct exons which code for alternating hydrophobic regions and crosslinking domains from the human elastin polypeptide gene 1.

Under appropriate conditions of temperature and ionic strength, elastin polypeptide undergoes a self-aggregation process known as coacervation. Coacervation is usually induced by an increase in temperature and causes the protein to separate from the solution as a second phase. Unlike most proteins which undergo denaturation when the temperature of the solution increases, elastin polypeptides become more ordered through coacervation 2.

LipA is a signal peptide from the B.subtilis genome. In general, signal peptides are responsible for directing preproteins (secretory proteins with a signal peptide region attached)through an appropriate secretory pathway3. LipA has been successfully used in the secretion of heterologous proteins such as cutinase by B. subtilis.

Notes

BioBrick standard was applied to the LipA-Human Elastin(EP20-24-24) Fusion Protein.

Source

All exons in EP20-24-24 are derived from the human elastin polypeptide gene. EP20-24-24 was used to study the effect of various combinations of exons on coacervation of elastin polypeptide. LipA originated from the B. subtilis genome4. Both components were produced as a fusion protein by GeneArt.

Sequence Annotation Location Component / Role(s)
LipA
start
Human Elastin (EP20-24-24)
stop
stop
1,102
1,3
103,699
700,702
703,705
CDS feature/cds
start_codon feature/start
feature/cds CDS
feature/stop stop_codon
feature/stop stop_codon
igem#experience
None
 
igem#sampleStatus
It's complicated
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K143035/1