SacB-EAK16

BBa_K143038 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K143038
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Qin Qi
Date created: 2008-09-17 11:00:00
Date modified: 2015-05-08 01:10:24

SacB-EAK16-II Fusion Protein



Types
DnaRegion

Roles
Coding

CDS

Sequences BBa_K143038_sequence (Version 1)

Description

EAK16-II is a sixteen amino acid peptide that self-assembles to form β-sheet structures in an aqueous medium. The alternating positive and negative charges (--++--++) are responsible for creating an electrostatic attraction between adjacent peptides 1, triggering self-assembly when the EAK16-II peptides are exposed to physiological media or salt solution. When examined under SEM, a well-ordered nanofibre structure is formed by the association of the EAK16-II peptides and these nanofibres can futher aggregate to form a membranous 3D scaffold.

SacB is a signal peptide used in the Sec-SRP (secretory signal recognition particle) pathway by B. subtilis. Signal peptides are responsible for directing preproteins (secretory proteins with a signal peptide region attached) through an appropriate secretory pathway. In the case of the Sec-SRP signal peptide, they direct preproteins from the cytoplasm into the growth medium. SacB has been successfully used in the secretion of heterologous proteins such as acid-stable α-amylase, cystatin and interleukin-3 by B.subtilis 2.

Notes

BioBrick standard was applied to the SacB-EAK16-II Fusion Protein.

Source

EAK16-II is a segment from zuotin, a yeast protein. SacB was identified from the initial part of certain preprotein genes that utilises the the Sec-SRP secretory pathway 3. Both components were synthesised as a fusin protein by GeneArt.

Sequence Annotation Location Component / Role(s)
SacB
EAK16-II
start
stop
stop
1,96
97,144
1,3
145,147
148,150
feature/cds CDS
CDS feature/cds
feature/start start_codon
feature/stop stop_codon
stop_codon feature/stop
igem#experience
None
 
igem#sampleStatus
It's complicated
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K143038/1