Types | DnaRegion
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Roles | engineered_region
Generator
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Sequences | BBa_K1875012_sequence (Version 1)
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Description
This composite part can be used to express a guide RNA (g8) from BostonU 2016???s project Gemini. Specifically, this part expresses g8, a guide RNA that directly recognizes the 20bp target sequence 5??? GTTGCGCGTCCGTATCAAGG 3???. This 20bp target sequence can be found in composite part BBa_K1875004.
We used transient transfection into HEK293FT cells to validate functionality of this part. We co-delivered a plasmid with BBa_K1875001 (this composite part with g8), a plasmid with BBa_K1875004 (the corresponding GFP reporter composite part with g8???s target sequence), and a plasmid expressing dCas9-VPR. We assayed for fluorescence of GFP using flow cytometry. We compared expression levels of GFP both with and without the guide RNA. Our results indicate that there is a low level of expression without g8 and a high level of expression with g8.
Notes
This part produces the guide in BBa_K1875006 and the guide that matches the target sequence on BBa_K1875015
Source
This plasmid was based off of the work by Feng Zhanf at MIT and the x330 plasmid