BBa_K1963004

BBa_K1963004 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K1963004
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Frank Sargent
Date created: 2016-10-06 11:00:00
Date modified: 2016-10-23 09:17:38

An sRNA system for down-regulation of E. coli fliC encoding flagellin.



Types
DnaRegion

Roles
RNA

mature_transcript_region

Sequences BBa_K1963004_sequence (Version 1)

Description

This is a multi-sequence system for small RNA (sRNA) production in an E. coli host - or especially with co-expression of E. coli Hfq. The system is based on the BBa_K1963002 template and has the proD strong promoter, followed by a short antisense sequence targeting the 5' end of the fliC transcript, followed by the E. coli micC hairpin, followed by the strong terminator sequence T1/TE. The anti fliC sRNA is placed betweeen C-193 and T-194. The system should impair motility of E. coli.

Notes

This part is RFC[10] compliant.

Source

This part was generated by PCR using phosphorylated primers and BBa_K1963002 as template.

Sequence Annotation Location Component / Role(s)
proD promoter
sRNA
micC loop
terminator
1,193
194,218
219,296
297,426
promoter feature/promoter
non_covalent_binding_site feature/binding
feature/stem_loop stem_loop
feature/misc sequence_feature
igem#experience
Works
 
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K1963004/1