BBa_K2014005

BBa_K2014005 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K2014005
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Daria Niewiadomska
Date created: 2016-10-11 11:00:00
Date modified: 2016-10-14 02:32:55

AraC-pBAD->sfGFP_B



Types
DnaRegion

Roles
engineered_region

Generator

Sequences BBa_K2014005_sequence (Version 1)

Description

We were using standard AraC-pBAD promoter to compare the influence of different ORFs structures coding for the same protein sfGFP.

Notes

We were looking for the best method to optimize gene expression in E.coli.

Source

The AraC-pBAD promoter is a fragment of E.coli K-12 genome. We used one of the sfGFP permutation, with optimized codon sequence.

Sequence Annotation Location Component / Role(s)
AraC CDS
O2 region
O1 region
-10 signal
i1-i2 region
5'UTR
ht-sfGFP-B
-35 signal
CAP binding site
His-Tag
1,879
909,924
1066,1087
1177,1181
1113,1155
1191,1217
1218,1967
1153,1157
1111,1121
1218,1247
CDS feature/cds
operator feature/operator
feature/operator operator
sequence_feature feature/misc
feature/binding non_covalent_binding_site
feature/misc sequence_feature
CDS feature/protein
sequence_feature feature/misc
non_covalent_binding_site feature/binding
tag feature/tag
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K2014005/1