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BBa_K239002

BBa_K239002 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K239002

Generated By: https://synbiohub.org/public/igem/igem2sbol/1

Created by: Axel Nystrom

Date created: 2009-06-21 11:00:00

Date modified: 2015-05-08 01:11:36

HypB promoter, activated by Fnr during oxygen deficiency

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Details

Types	DnaRegion
Roles	promoter Regulatory
Sequences	BBa_K239002_sequence (Version 1)

Description

Sequence contains 2 Fnr binding sites but no specific promoter sequence.
Function: Switched on during anaerobic conditions.
Area of application: Detection of when the cell is switching to anaerobic conditions.

Notes

Detect and remove possible restriction sites: XbaI, EcoRI, PstI, SpeI, AgeI, BamHI, BglII, NogMIV, NotI and XhoI. No restriction site had to be removed. Sequence starts 3 bp before the first Fnr binding site and ends 37 pb after second Fnr binding site.

Source

Genomic sequence from biocyc, Escherichia coli K-12. Native unmodified sequence.

Sequence Annotations

Sequence Annotation	Location	Component / Role(s)
Fnr Fnr -10	4,17 110,123 147,152	non_covalent_binding_site feature/binding non_covalent_binding_site feature/binding promoter feature/promoter