BBa_K300002

BBa_K300002 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K300002
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Giacomo Zambianchi, Alessandro Ranieri, Manuel Lupotto, Paolo Magni
Date created: 2010-10-02 11:00:00
Date modified: 2015-05-08 01:11:51

Phasin (PhaP) - head domain



Types
DnaRegion

Roles
Protein_Domain

polypeptide_domain

Sequences BBa_K300002_sequence (Version 1)

Description

-

Notes

It is identical to BBa_K208001, but it lacks the stop codon in order to support protein fusions.

It has been designed as a head domain:

The Prefix sequence is 5'-GAATTCGCGGCCGCTTCTAG-3' (RFC10 Prefix)

The Suffix sequence is 5'-ACTAGTAGCGGCCGCTGCAG-3' (RFC23 Suffix)

For these reasons, a tail domain or an internal domain (compatible with RFC23) are ready to be assembled downstream to create protein fusions.


CONSTRUCTION METHOD:
BBa_K208001 (provided by iGEM HQ in pSB3K3 in RFC23 standard) was PCR-amplified/mutagenized with primers:
phaP10F 5'-GCTTCTAGATGATCCTCACCCCGGAACA-3'
phaPSR: 5'-GCTACTAGTGGCAGCCGTCGTCTTCTTTG-3'
in order to delete the stop codon.
The PCR product was ran on a 1% agarose gel, gel-extracted, cut with XbaI-SpeI and ligated with pSB1AK3 (previously cut with XbaI-SpeI and dephosphorylated).
Positive clones were found through digestion screening/sequencing.

Source

Ralstonia eutropha genomic DNA.

Sequence Annotation Location Component / Role(s)
Start
1,3
start_codon feature/start
igem#experience
None
 
igem#sampleStatus
It's complicated
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K300002/1