BBa_K354003

BBa_K354003 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K354003
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Gregory Meyer
Date created: 2010-10-19 11:00:00
Date modified: 2015-05-08 01:12:11

PlcR Promoter



Types
DnaRegion

Roles
promoter

Regulatory

Sequences BBa_K354003_sequence (Version 1)

Description

The PlcR promoter is positively regulated by the PlcR-PapR fusion peptide and is repressed by the SpooA peptide. Derived from Bacillus thuringiensis, the PlcR promoter regulates the expression of a host of genes, one of which is the PlcR gene itself. Thus there exists a positive-feedback loop controlling the activation of the operon. Within the promoter are clearly defined binding regions for both the PlcR-PapR fusion peptide as well as the SpooA repressor protein.

Notes

So as to create a library of promoters with differing transcriptional activities, randomised nucleotides were introduced into the -10 box - the binding site for the RNAP sigma-factor.

Source

The sequence is derived from the PlcR promoter in Bacillus thuringiensis and was synthesized via primer extension.

Sequence Annotation Location Component / Role(s)
Sigma A binding site
PlcR binding site
Transcriptional start site
SpoOA binding site
SpoOA binding site
64,69
27,43
75,75
9,15
51,57
non_covalent_binding_site feature/binding
non_covalent_binding_site feature/binding
start_codon feature/start
non_covalent_binding_site feature/binding
non_covalent_binding_site feature/binding
igem#sampleStatus
It's complicated
igem#status
Planning
 
synbiohub#ownedBy
user/myers
 
synbiohub#ownedBy
user/james
 
synbiohub#topLevel
BBa_K354003/1