BBa_K374009

BBa_K374009 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K374009
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Lisa Blanc Iversen, Maya Friis Kjaergaard, Annemi Jollmann, Anja Sander and Grzegorz Słodkowicz
Date created: 2010-10-19 11:00:00
Date modified: 2015-05-08 01:12:16

Gifsy2 promoters and Gifsy2 repressor gtgR



Types
DnaRegion

Roles
Composite

engineered_region

Sequences BBa_K374009_sequence (Version 1)

Description

Gifsy2 is a temperate phage present in many of the Salmonella enterica serovar Typhimurium strains. This part contains the Gifsy2 promoters and the Gifsy2 repressor. The promoters are divergent; consisting of pR[Gifsy2] and pRM[Gifsy2]. Downstream of the pRM[Gifsy2] promoter is the repressor gtgR. gtgR binds to the operator regions located between the two divergent promoters and is predicted to act both as an activator of the pRM[Gifsy2] and a repressor of the pR[Gifsy2]. The regulatory system is similar to the one found in lambda phages but induction is repressor cleavage independent. Instead small lexA regulated anti-repressor proteins bind to the repressor and prevents its DNA activity. The part has been used and tested in E. Coli.

Notes

The part contains both promoters and repressor. We chose not to separate the repressor gene from the promoter because we wanted to keep the natural RBS.

Source

Genomic sequence from the Salmonella phage Gifsy2

Sequence Annotation Location Component / Role(s)
gtgR
pRM
pR
1,411
418,423
491,496
CDS feature/cds
feature/promoter promoter
promoter feature/promoter
igem#experience
Works
 
igem#sampleStatus
It's complicated
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K374009/1