thRS1-ChZ

BBa_K537001 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K537001
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Natasia Kruger
Date created: 2011-07-18 11:00:00
Date modified: 2015-05-08 01:12:36

Theophylline Riboswitch 1-CheZ



Types
DnaRegion

Roles
Generator

engineered_region

Sequences BBa_K537001_sequence (Version 1)

Description

This DNA part will encode for an RNA riboswitch senstive to theophylline. The riboswitch, in the absence of theophylline, prevents the exposure of the RBS. When theophylline is present, it binds to the riboswitch exposing the RBS and allows for the translation of the adjoining gene. In this case, the gene which will be expressed is CheZ, which a protein fundamental to bacterial movement.

Notes

The effectiveness of the theophylline riboswitch is determined by the ability of the RNA 'loop' to hide the RBS preventing translation. The sequence of bases within the riboswitch will determine the formation of the loop and its leakiness.

Source

The CheZ gene was isolated from genomic DNA using PCR where the forward primers in the reaction contained the sequence for the theophylline riboswitch.

Sequence Annotation Location Component / Role(s)
Aptamer
Theophylline riboswitch (type 1)
rbs
CheZ
start
1,26
1,59
47,49
57,698
57,59
feature/misc sequence_feature
feature/misc sequence_feature
ribosome_entry_site feature/rbs
CDS feature/cds
feature/start start_codon
igem#experience
Works
 
igem#sampleStatus
In stock
igem#status
Available
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K537001/1