Salty_PduA

BBa_K562007 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K562007
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Frank Sargent
Date created: 2011-09-15 11:00:00
Date modified: 2015-05-08 01:12:41

Salty_PduABTU BMC Components



Types
DnaRegion

Roles
Coding

CDS

Sequences BBa_K562007_sequence (Version 1)

Description

This is a composite part comprising a constitutive promoter, which is the tatABCD promoter from E. coli K-12, driving production of the PduA and PduB proteins from Salmonella enterica serovar Typhimurium LT2 (identical to part BBa_K562003) AND proteins PduT and PduU. These are all components of the Salmonella bacterial microcompartment (BMC). The PduB and PduU gene product carry C-terminal 6-His affinity/epitope tags. Production of the PduB and PduU proteins has been verified by Western immunoblotting (anti-penta-His) and production of PduA, PduB, PduT and PduU have been confirmed by 35S-Met labelling. The proteins have also been purified from E. coli by immobilised metal affinity chromatography (IMAC) and identified by tryptic peptide mass fingerprinting. The construct is cloned as an EcoRI / PstI fragment into pSB1C3. The clone is also known as pSB-ABTU in the Sargent Laboratory, Dundee, UK.

Notes

Native PstI sites in pduB and pduU were removed by site-directed mutagenesis. The fragment also carries an engineered BamHI site at its extreme 3' end.

Source

Derived from Salmonella enterica serovar Typhimurium LT2 genomic sequence.

Sequence Annotation Location Component / Role(s)
BBa_K562003
synthetic RBS
pduA gene
pduB gene
Hexa-Histidine Tag
synthetic RBS
pduT gene
pduU gene
Hexa-Histidine Tag
1,1236
107,112
119,403
400,1209
1210,1227
1240,1245
1252,1806
1806,2153
2154,2171
feature/BioBrick engineered_region
ribosome_entry_site feature/rbs
CDS feature/cds
CDS feature/cds
feature/misc sequence_feature
ribosome_entry_site feature/rbs
CDS feature/cds
CDS feature/cds
feature/misc sequence_feature
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synbiohub#ownedBy
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synbiohub#topLevel
BBa_K562007/1