BBa_K611021

BBa_K611021 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K611021
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Nicholas Csicsery
Date created: 2011-09-18 11:00:00
Date modified: 2015-05-08 01:12:53

LacI Promoter Variant #1



Types
DnaRegion

Roles
Regulatory

promoter

Sequences BBa_K611021_sequence (Version 1)

Description

Parts K611021 through K611027 are variants of the wild type LacI repressible promoter, BBa_R0010. These parts were generated through three rounds of mutagenic PCR and each have around 1 to 7 mutations. Each of these variants differ in properties such as transcriptional strength and repressor binding affinity and have been well characterized. This can be very useful in tuning genetic circuits for specific outputs.

Notes

We chose to mutate this part from a well known promoter so that any changes in behavior would be easy to observe.

Source

Mutagenic PCR of BBa_R0010.

Sequence Annotation Location Component / Role(s)
t->a
a->g
CAP binding site
a->g
a->g
-35
t->c
-10
LacI binding site
t->c
a->t
start
end of LacI coding region (inactive)
37,37
40,40
89,126
103,103
108,108
137,142
151,151
161,166
166,200
176,176
196,196
173,173
1,88
sequence_alteration feature/mutation
feature/mutation sequence_alteration
non_covalent_binding_site feature/binding
sequence_alteration feature/mutation
sequence_alteration feature/mutation
promoter feature/promoter
feature/mutation sequence_alteration
feature/promoter promoter
non_covalent_binding_site feature/binding
sequence_alteration feature/mutation
feature/mutation sequence_alteration
start_codon feature/start
feature/cds CDS
igem#sampleStatus
Not in stock
igem#status
Unavailable
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K611021/1