BBa_K625002

BBa_K625002 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K625002
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Michael Eichenberger
Date created: 2011-09-20 11:00:00
Date modified: 2015-05-08 01:12:56

Pu promoter long version with stop codon



Types
DnaRegion

Roles
promoter

Regulatory

Sequences BBa_K625002_sequence (Version 1)

Description

This is an adapted version of the Pu promoter BBa_I723020. The original design contains the RBS and first 81bp of the XylU. To prevent unwanted fusion proteins from emerging (when this biobrick is cloned without scar), a double stop codon was inserted at the end of the promoter.

Notes

The whole promoter region with all putative regulatory sequences was BioBricked. Stop codons were added in frame with the XylU coding region.

Source

PCR reaction on plasmid DNA provided by Prof. Sven Panke. pCK04AxylR

Sequence Annotation Location Component / Role(s)
XylR binding site
PprA binding site
IHF binding site
-24
-12
XylR binding site
xylU start codon
XylU
double stop codon
37,52
42,61
130,157
182,188
193,196
69,90
239,241
239,319
319,325
non_covalent_binding_site feature/binding
non_covalent_binding_site feature/binding
feature/binding non_covalent_binding_site
promoter feature/promoter
feature/promoter promoter
feature/binding non_covalent_binding_site
start_codon feature/start
CDS feature/cds
stop_codon feature/stop
igem#sampleStatus
It's complicated
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K625002/1