BBa_K957003

BBa_K957003 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_K957003
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Dylan Patrick Webster
Date created: 2012-09-24 11:00:00
Date modified: 2015-05-08 01:13:49

Salicylate inducible mtrB



Types
DnaRegion

Roles
Generator

engineered_region

Sequences BBa_K957003_sequence (Version 1)

Description

The purpose of this part is to upregulate mtrB expression in response to salicylate. When expressed in a Shewanella strain lacking mtrB on the chromosome, this composite part will function as a component of a biosensor. Specifically, when such a complemented strain is inoculated in a microbial electrochemical system, current output will increase in response to salicylate. If coupled to the expression of a BioBrick part that degrades naphthalene to salicylate, this part will function as part of a naphthalene biosensor.

Notes

Constructed using non-BioBrick AscI cutsite of BBa_K957001.

Source

mtrB is originally derived from the mtrCAB operon of Shewanella oneidensis MR-1; BioBrick part BBa_K098994 was used as DNA source.

The salicylate sensitive region was isolated via PCR from a plasmid containing BBa_K228227, designed by PKU_Beijing 2009.

Sequence Annotation Location Component / Role(s)
K228004
nahR
Pr
Psal
AscI cut site
mtrB
K098989
1,1052
1,903
904,993
982,1050
1054,1061
1088,3181
1088,3181
engineered_region feature/BioBrick
CDS feature/cds
promoter feature/promoter
promoter feature/promoter
sequence_feature feature/misc
feature/cds CDS
feature/BioBrick engineered_region
igem#experience
None
 
igem#sampleStatus
It's complicated
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_K957003/1