BBa_M36177

BBa_M36177 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_M36177
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Majed Magzoub, Guhan Venkataraman, Joe Carpenter
Date created: 2015-10-22 11:00:00
Date modified: 2015-12-03 02:25:54

pH sensor



Types
DnaRegion

Roles
Regulatory

promoter

Sequences BBa_M36177_sequence (Version 1)

Description

pH sensor, active within range 5.5-7.0. Our part is based on the acid inducible promoter region of a rcFB gene (procuding rcFB protein) in Lactococcus lactis. Ou assumptions are as follows: (1) generally Lactococcus lactis genes will work in E. coli, (2) all transcription factors specific to this rcFB gene are endogenous to E. coli, (3) there is no additional layer of feedback controlling the rcFB gene, (4) the rcFB gene is more responsive to lactic acid/lactate than carbohydrates (to which it also reacts), (5) base level of transcription is low in comparison to when gene is turned on.

Notes

We were limited by the following restrictions (1) 200-1500 bp size limit, (2) no Bbsl, Bsal, or BsmBI sites, (3) no repeats of length greater than 5 base pairs.

Source

rcFB transcriptional regulator in Lactococcus lactis genome.

Sequence Annotation Location Component / Role(s)
promoter
1,431
promoter feature/promoter
igem#experience
None
 
igem#status
Planning
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_M36177/1