cI HK022

BBa_R1050 Version 1

Component

Source:
http://parts.igem.org/Part:BBa_R1050
Generated By: https://synbiohub.org/public/igem/igem2sbol/1
Created by: Reshma Shetty, Drew Endy
Date created: 2003-01-31 12:00:00
Date modified: 2015-05-08 01:14:15

Promoter, Standard (HK022 cI regulated)



Types
DnaRegion

Roles
Regulatory

promoter

Sequences BBa_R1050_sequence (Version 1)

Description

[Note: This is the same part as R0050 except that the -10 and -35 sites and spacing have been changed to comply with BBa_S0001].

The pR regulatory region is a 98 base-pair sequence with standard BioBrick prefix and suffix sections on its ends. It contains two operator sites at which HK022 cI protein can bind cooperatively. The -35 and -10 regions from pR are included along with some flanking sequences. The cutoff for the 5' end of the regulatory region was placed just after the pM -10 region which promotes transcription of a gene upstream (thus the pM -10 region is not included). The cutoff for the 3' end of the regulatory region was placed immediately prior to the RBS.



Notes

Derived from STHK022N.
Modified to comply with BBa_S0001:
TTGACA-17N-GATACT

Literature claims that there is no cross-talk between HK022 cI regulatory region, Lambda cI, 434 cI and P22 cI, but this has not been verified experimentally by the synthetic biology group at MIT.

Source

Bacteriophage HK022.

Sequence Annotation Location Component / Role(s)
-35
OR2
OR1
putative
-10
BBa_R1050
8,14
14,28
38,52
44,44
31,36
1,56
promoter feature/promoter
non_covalent_binding_site feature/binding
feature/binding non_covalent_binding_site
start_codon feature/start
promoter feature/promoter
engineered_region feature/BioBrick
igem#experience
None
 
igem#partStatus
Released HQ 2013
igem#sampleStatus
In stock
igem#status
Available
 
synbiohub#ownedBy
user/james
 
synbiohub#ownedBy
user/myers
 
synbiohub#topLevel
BBa_R1050/1