CnU6CnU6_terminator Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans JEC21
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0010BBa_B0010 Version 1 (Component)T1 from E. coli rrnB
BBa_B0015BBa_B0015 Version 1 (Component)double terminator (B0010-B0012)
Scar 25BBa_B0105 Version 1 (Component)RFC 25 Scar Sequence
BBa_B0011BBa_B0011 Version 1 (Component)LuxICDABEG (+/-)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B1001BBa_B1001 Version 1 (Component)Terminator (artifical, small, %T~=90)
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
BBa_B0014BBa_B0014 Version 1 (Component)double terminator (B0012-B0011)
BBa_B0025BBa_B0025 Version 1 (Component)double terminator (B0015), reversed
BBa_B1006BBa_B1006 Version 1 (Component)Terminator (artificial, large, %T~>90)
rrnOrrnO_ter Version (Component) BBa_K2170145BBa_K2170145 Version 1 (Component)EspP autotransporter (EspP_double terminator) in RFC[25] C-part
BBa_B0016BBa_B0016 Version 1 (Component)Terminator (T7 RNAP specific, T_Phi)
RFC 37BBa_K245009 Version 1 (Component)RFC 37 Scar Sequence
BBa_K1321005BBa_K1321005 Version 1 (Component)Synthetic Phytochelatin EC(20) RFC[25]
BBa_K1321337BBa_K1321337 Version 1 (Component)sfGFP in Freiburg format (RFC 25)
tetA(C)fBBa_J31007 Version 1 (Component)tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
BBa_M36010BBa_M36010 Version 1 (Component)Transcription Terminator (Strong)
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K1321339BBa_K1321339 Version 1 (Component)CBDcenA+Linker, RFC 25 standard
tADH1BBa_J63002 Version 1 (Component)ADH1 terminator from S. cerevisiae
T500T500 Version 1 (Component) T1_TET1_TE Version 1 (Component) BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K1321009BBa_K1321009 Version 1 (Component)Nickel Binding Protein (NiBP) Freiburg format (RFC[25])
BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon
BBa_K2170220BBa_K2170220 Version 1 (Component)EspP-autotransporter in RFC[25]
BBa_B0024BBa_B0024 Version 1 (Component)double terminator (B0012-B0011), reversed
BBa_K2170146BBa_K2170146 Version 1 (Component)EspP autotransporter with N-terminal A3C5 (A3C5_EspP_double terminator) in RFC[25] C-part
BBa_K1150012BBa_K1150012 Version 1 (Component)BGH terminator
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_K1321011BBa_K1321011 Version 1 (Component)SmtA metallothionein in Freiburg format (RFC[25])
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
tetA(C)bBBa_J31006 Version 1 (Component)tetracycline resistance protein TetA(C) (backwards) [cf. BBa_J31007]