Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Composite Sequence Pull
Composite Version 1 (Activity)
When multiple sources where combined to make a new part.

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

BBa_J04500
BBa_J04500 Version 1 (Component)
IPTG inducible promoter with RBS

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_J70394
BBa_J70394 Version 1 (Component)
J04450 {0,5:5,0} part

BBa_J70399
BBa_J70399 Version 1 (Component)
from J04450 {0,5:15,10}

BBa_J70395
BBa_J70395 Version 1 (Component)
from J04430, {0,5:5,0}

BBa_K209402
BBa_K209402 Version 1 (Component)
AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]

BBa_J70400
BBa_J70400 Version 1 (Component)
from J04430, {0,5:15,10}

BBa_J70396
BBa_J70396 Version 1 (Component)
from I6030, {0,5:5,0}

BBa_K209400
BBa_K209400 Version 1 (Component)
AarI B-C part, hM4D

BBa_J14459
BBa_J14459 Version 1 (Component)
Composite part comprised of J04500 and J04630

mRFP1
BBa_J04650 Version 1 (Component)
E1010.B0015

GFP.Term
BBa_J04630 Version 1 (Component)
E0040.B0015

BBa_S03119
BBa_S03119 Version 1 (Component)
--Specify Parts List--

BBa_K209415
BBa_K209415 Version 1 (Component)
AarI B-C part, hM2D

BBa_J04051
BBa_J04051 Version 1 (Component)
RFP with tag

BBa_K737017
BBa_K737017 Version 1 (Component)
This part conteins gvpC-20psi protein

BBa_J70042
BBa_J70042 Version 1 (Component)
6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)

BBa_J04421
BBa_J04421 Version 1 (Component)
ECFP Coding Device with Promoter, RBS, Coding Sequence, and Terminator

BBa_J70401
BBa_J70401 Version 1 (Component)
from I6030, {0,5:15,10}

BBa_S05036
BBa_S05036 Version 1 (Component)
J04450:K524003

BBa_S04189
BBa_S04189 Version 1 (Component)
J04450:I7101

BBa_S04183
BBa_S04183 Version 1 (Component)
J04450:I6413

BBa_S04184
BBa_S04184 Version 1 (Component)
I6413:J04450

BBa_S04310
BBa_S04310 Version 1 (Component)
J04450:B0040

BBa_S04185
BBa_S04185 Version 1 (Component)
I7101:J04450

BBa_J14462
BBa_J14462 Version 1 (Component)
Composite part comprised of J13002 and J04650

BBa_T1001
BBa_T1001 Version 1 (Component)
Kill this part

BBa_S05037
BBa_S05037 Version 1 (Component)
K524003:J04450

BBa_S05038
BBa_S05038 Version 1 (Component)
J04450:K524200

BBa_K209401
BBa_K209401 Version 1 (Component)
AarI B-C part, Rs1.3

BBa_J70044
BBa_J70044 Version 1 (Component)
6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA

BBa_C0450
BBa_C0450 Version 1 (Component)
Terminator (C0440 + C0440)

BBa_K737016
BBa_K737016 Version 1 (Component)
This part conteins gvpA protein's coding sequence.

BBa_K1919500
BBa_K1919500 Version 1 (Component)
K1321200+J04450 (Vitreoscilla hemoglobin + mRFP)

BBa_S05173
BBa_S05173 Version 1 (Component)
J04500:E1010

BBa_S03708
BBa_S03708 Version 1 (Component)
J23116:P0440

BBa_K1440088
BBa_K1440088 Version 1 (Component)
long parts consist of part2 and part3

Riboswitch
BBa_J04700 Version 1 (Component)
Part containing promoter, riboswitch mTCT8-4 theophylline aptamer (J04705), and RBS

BBa_J70010
BBa_J70010 Version 1 (Component)
A BioScaffold Part (Uses PpiI), for offset see Part Design page

BBa_K541596
BBa_K541596 Version 1 (Component)
Reflectin gene with J04500 promoter

nadE
BBa_K1373000 Version 1 (Component)
This part encodes NAD synthetase