SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
ATGATG Version 1 (Component) Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_J176068BBa_J176068 Version 1 (Component)Polycomb ATF neg. ctrl. 2
BBa_J176084BBa_J176084 Version 1 (Component)Polycomb ATF neg. ctrl. 5 "
BBa_J176088BBa_J176088 Version 1 (Component)Polycomb ATF neg. ctrl. 1 "
BBa_J176086BBa_J176086 Version 1 (Component)Polycomb ATF neg. ctrl. 7 "
BBa_J176085BBa_J176085 Version 1 (Component)Polycomb ATF neg. ctrl. 6 "
BBa_J176074BBa_J176074 Version 1 (Component)Polycomb ATF neg. ctrl. 5
BBa_J176073BBa_J176073 Version 1 (Component)Polycomb ATF neg. ctrl. 3
BBa_J176083BBa_J176083 Version 1 (Component)Polycomb ATF neg. ctrl. 3 "
BBa_J176067BBa_J176067 Version 1 (Component)Polycomb ATF neg. ctrl. 1
BBa_J176087BBa_J176087 Version 1 (Component)Polycomb ATF neg. ctrl. 8 "
BBa_J176076BBa_J176076 Version 1 (Component)Polycomb ATF neg. ctrl. 7
BBa_J176075BBa_J176075 Version 1 (Component)Polycomb ATF neg. ctrl. 6
BBa_J176077BBa_J176077 Version 1 (Component)Polycomb ATF neg. ctrl. 8
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
ATF1BBa_J45014 Version 1 (Component)alcohol acetyltransferase I; converts isoamyl alcohol to isoamyl acetate (banana odor)
BBa_K823003BBa_K823003 Version 1 (Component)P<sub>veg</sub>
BBa_J176080BBa_J176080 Version 1 (Component)Polycomb ATF4 "
BBa_J176064BBa_J176064 Version 1 (Component)Polycomb ATF4
BBa_J176066BBa_J176066 Version 1 (Component)Polycomb ATF6
BBa_J176082BBa_J176082 Version 1 (Component)Polycomb ATF6 "
BBa_J176081BBa_J176081 Version 1 (Component)Polycomb ATF5 "
BBa_J176063BBa_J176063 Version 1 (Component)Polycomb ATF3
BBa_J176079BBa_J176079 Version 1 (Component)Polycomb ATF3
BBa_J176065BBa_J176065 Version 1 (Component)Polycomb ATF5
SYFP2BBa_K864100 Version 1 (Component)Super Yellow Fluorescent Protein 2 (SYFP2)
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
BBa_K809601BBa_K809601 Version 1 (Component)GAL promoter (kozak) without start codon ATG
BBa_K117002BBa_K117002 Version 1 (Component)LsrA promoter (indirectly activated by AI-2)
BBa_K1763442BBa_K1763442 Version 1 (Component)MaSp1/2[1:2]-12(1C3)
BBa_K1763438BBa_K1763438 Version 1 (Component)MaSp1/2[2:1]-12(1C3)
ctrABO_31903 Version 1 (Component) RFC105 ABBa_K1362414 Version 1 (Component)N-terminal start overhang (T)(A)-(G)ATG=RBS+Start RFC[105] A
BBa_K079019BBa_K079019 Version 1 (Component)Lac 2 - operator library member
ATF1 generBBa_J45199 Version 1 (Component)Banana odor enzyme (ATF1) generator
BBa_K1763439BBa_K1763439 Version 1 (Component)MaSp1/2[2:1]-12(T7)
BBa_K1763443BBa_K1763443 Version 1 (Component)MaSp1/2[1:2]-12(T7)
Lin-2BO_9115 Version 1 (Component) BBa_M36009BBa_M36009 Version 1 (Component)5' Bicistronic UTR (strong), does not include ATG start