SynBioHub

Public

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

ATG
ATG Version 1 (Component)

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

Scar25 ATG
BBa_K1319106 Version 1 (Component)
RFC 25 Translation Start Scar Sequence

Public

BBa_K782041
BBa_K782041 Version 1 (Component)
TALD based fast degradable KRAB (CL1-PEST tag)

Public

BBa_K782040
BBa_K782040 Version 1 (Component)
TALA based fast degradable KRAB (CL1-PEST tag)

Public

BBa_K782042
BBa_K782042 Version 1 (Component)
TALB based fast degradable KRAB (CL1-PEST tag)

Public

His-Stop
BBa_K133133 Version 1 (Component)
His affinity tag-stop

Public

BBa_J04031
BBa_J04031 Version 1 (Component)
GFP w/LVA tag

Public

PEST
BBa_J176018 Version 1 (Component)
PEST

Public

HA
BBa_I712008 Version 1 (Component)
HA affinity tag

Public

//test
test Version 1 (Collection)

Public

NLS
BBa_J176008 Version 1 (Component)
NLS

Public

BBa_K105012
BBa_K105012 Version 1 (Component)
10 aa flexible protein domain linker

Public

TAL
BBa_K1033000 Version 1 (Component)
Tyrosine ammonia-lyase (TAL) with RBS

Public

BBa_K1150002
BBa_K1150002 Version 1 (Component)
KRAB

Public

BBa_M0052
BBa_M0052 Version 1 (Component)
AANDENYADAS (moderately fast) SsrA degradation tag.

Public

linker
BBa_K133132 Version 1 (Component)
8 aa protein domain linker

Public

BBa_K1051202
BBa_K1051202 Version 1 (Component)
cln1-PEST

Public

BBa_K844000
BBa_K844000 Version 1 (Component)
10x-Histidine (10x-His) Tag with double stop codon (TAATAA)

Public

NLSmycSTOP
BBa_J176031 Version 1 (Component)
NLS myc stop

Public

RGD-His-St
BBa_K133036 Version 1 (Component)
RGD-His affinity tag-Stop

Public

BBa_K1150016
BBa_K1150016 Version 1 (Component)
HA tag

Public

BBa_M0051
BBa_M0051 Version 1 (Component)
AANDENYNYADAS. (Fast) SsrA degradation tag.

Public

BBa_K747095
BBa_K747095 Version 1 (Component)
TAL-Protein_TT6_Direpeat

Public

BBa_K747094
BBa_K747094 Version 1 (Component)
TAL-Protein_TG6_Direpeat

Public

LAA
BBa_M0050 Version 1 (Component)
AANDENYALAA. (Very fast) SsrA degradation tag.

Public

BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs

Public

G-His6(N)
BBa_K1362430 Version 1 (Component)
C-terminal His6 (N-Intein)

Public

BBa_K416003
BBa_K416003 Version 1 (Component)
Yeast Secretion Tag

Public

RBS-GFP-Te
BBa_I763020 Version 1 (Component)
RBS-GFP (+LVA Tag)-Terminators

Public

BBa_J70042
BBa_J70042 Version 1 (Component)
6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)

Public

BBa_K747012
BBa_K747012 Version 1 (Component)
TAL-Protein_TA1_Direpeat

Public

BBa_K747091
BBa_K747091 Version 1 (Component)
TAL-Protein_GT6_Direpeat

Public

TagD
BO_26775 Version 1 (Component)

Public

polyA
BBa_J176009 Version 1 (Component)
polyA2

Public

tagD
BO_32655 Version 1 (Component)

Public

tagD
BO_2942 Version 1 (Component)

Public

BBa_J70044
BBa_J70044 Version 1 (Component)
6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA

Public

His6
BBa_K1362431 Version 1 (Component)
N-terminal His6 (C-Intein)

Public

BBa_K747006
BBa_K747006 Version 1 (Component)
TAL-Protein_CG1_Direpeat

Public

BBa_K747072
BBa_K747072 Version 1 (Component)
TAL-Protein_GA5_Direpeat

Public

BBa_K747083
BBa_K747083 Version 1 (Component)
TAL-Protein_AT6_Direpeat

Public

BBa_K747093
BBa_K747093 Version 1 (Component)
TAL-Protein_TC6_Direpeat

Public

BBa_K747048
BBa_K747048 Version 1 (Component)
TAL-Protein_AA4_Direpeat

Public

BBa_K747051
BBa_K747051 Version 1 (Component)
TAL-Protein_AT4_Direpeat

Public

BBa_K747042
BBa_K747042 Version 1 (Component)
TAL-Protein_GG3_Direpeat

Public

BBa_K747063
BBa_K747063 Version 1 (Component)
TAL-Protein_TT4_Direpeat

Public

BBa_K747082
BBa_K747082 Version 1 (Component)
TAL-Protein_AG6_Direpeat

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