BBa_K112211BBa_K112211 Version 1 (Component){a~int!} The integrase gene with rbs ready to be attached with stop codon, BBb format
BBa_K1039022BBa_K1039022 Version 1 (Component)PhiC31 integrase and PhiC31 RDF under lock and key control with lacI Expression Cassette
BBa_K863205BBa_K863205 Version 1 (Component)GFP integrated in shuttle vector pECPP11JS (BBa_K863204) for integration in yeast
BBa_J95031BBa_J95031 Version 1 (Component)BioBrick promoter and RBS measurement reference standard for R. sphaeroides
BBa_M36689BBa_M36689 Version 1 (Component)HSE 2x Promoter + Bxb1 Recombinase w/ NLS + SV40 Terminator + attB site + CMV Reverse + attP site
BBa_K543016BBa_K543016 Version 1 (Component)Bacteriophage Lysis Cassette S105, R, and Rz under Tet promoter (conjugative)
BBa_M1680BBa_M1680 Version 1 (Component)Standard parts assembly for detection of high glucose levels using FAS promoter
xis domainBBa_K112202 Version 1 (Component){xis>} The lambda xis gene with no stop codon; assembly standard 21
BBa_K1791001BBa_K1791001 Version 1 (Component)Standard RBS expressing MS2 Coat protein ribozyme affinity purification (RAP)
BBa_K863209BBa_K863209 Version 1 (Component)BBa_500002 integrated in shuttle vector pECPP11JS (BBa_K863204) for integration in yeast
BBa_K863208BBa_K863208 Version 1 (Component)tvel35 integrated in shuttle vector pECPP11JS (BBa_K863204) for integration in yeast
BBa_K863207BBa_K863207 Version 1 (Component)tvel5 integrated in shuttle vector pECPP11JS (BBa_K863204) for integration in yeast
BBa_K1039020BBa_K1039020 Version 1 (Component)pVIII of M13 Bacteriophage with strong constitutive promoter (J23104) and RBS (B0034)
BBa_K2066112BBa_K2066112 Version 1 (Component)Synthetic Enhancer Project: Ntr promoter driven NRII2302 (mut) on UNS Standard
BBa_K1695045BBa_K1695045 Version 1 (Component)pL8-UV5 + RBS Bacteriophage λ Codon Optimized Lysis Cassette S mutant R Rz
BBa_K1695048BBa_K1695048 Version 1 (Component)pL8-UV5 + RBS Bacteriophage 21 Codon Optimized Lysis Cassette S mutant R Rz
BBa_K1044007BBa_K1044007 Version 1 (Component)T7 promoter (strong promoter from T7 bacteriophage)+RBS (Elowitz 1999) -- defines RBS efficiency
SBOL Compliant SoftwareSBOLCompliantSoftware_collection Version 1 (Collection)A collection of software that supports the Synthetic Biology Open Language (SBOL) standard
xisBBa_K112205 Version 1 (Component){rbs.xis!} The xis gene with native rbs site and stop codon; assembly standard 21
MtrBBBa_K1748001 Version 1 (Component)Extracelllular metal reducing respiratory system integral outer-membrane β-barrel protein MtrB
xisBBa_K112204 Version 1 (Component){a~xis!} The bacteriophage lambda xis gene ready to have rbs attached and stop codon; assembly stand
BBa_M36427BBa_M36427 Version 1 (Component)Recombinase Site 1 (Bxb1 AttB)
BBa_K175050BBa_K175050 Version 1 (Component)aTc inducible GFP-LVA generator with integrated I-SceI RS + I-SceI RS + TetR generator
BBa_K189060BBa_K189060 Version 1 (Component)Gp15 of Bacteriophage Mu
BBa_K929300BBa_K929300 Version 1 (Component)Potsdam Standard Backbone
BBa_K1695013BBa_K1695013 Version 1 (Component)Riboswitch + Bacteriophage 21 codon optimized R gene
BBa_K1695014BBa_K1695014 Version 1 (Component)Riboswitch + Bacteriophage 21 codon optimized Rz gene
BBa_K1695012BBa_K1695012 Version 1 (Component)Riboswitch + Bacteriophage 21 codon optimized S gene
BBa_K299800BBa_K299800 Version 1 (Component)standard biobrick scar (if next part starts with ATG)
MLSBBa_K1119001 Version 1 (Component)Mitochondrial Leader Sequence with RFC25 standard
BBa_K112995BBa_K112995 Version 1 (Component)BBb1 assembly vector - C/A
BBa_K1484005BBa_K1484005 Version 1 (Component)AmilCP chromoprotein in BBa and MoClo standard
BBa_K1195011BBa_K1195011 Version 1 (Component)T7 Bacteriophage Minor Capsid Protein (Small Mutant 2)
BBa_K1195012BBa_K1195012 Version 1 (Component)T7 Bacteriophage Minor Capsid Protein (Large Mutant 2)
BBa_K1695042BBa_K1695042 Version 1 (Component)Riboswitch Bacteriophage 21 Codon Optimized Lysis Cassette S R Rz
BBa_K101015BBa_K101015 Version 1 (Component)Standard Promoter with RBS, GFP and terminator
BBa_K1695049BBa_K1695049 Version 1 (Component)pL8-UV5 + Riboswitch Bacteriophage 21 Codon Optimized Lysis Cassette S R Rz
SEGASEGA_collection Version 1 (Collection)In the Standardized Genome Architecture (SEGA), genomic integration of DNA fragments is enabled by λ-Red recombineering and so-called landing pads that are a common concept in synthetic biology and typically contain features that i) enable insertion of additional genetic elements and ii) provide well-characterized functional parts such as promoters and genes, and iii) provides insulation against genome context-dependent effects. The SEGA landing pads allow for reusable homology regions and time-efficient construction of parallel genetic designs with a minimal number of reagents and handling steps. SEGA bricks, typically synthetic DNA or PCR fragments, are integrated on the genome simply by combining the two reagents (i.e. competent cells and DNA), followed by incubation steps, and successful recombinants are identified by visual inspection on agar plates. The design of the SEGA standard was heavily influenced by the Standard European Vector Architecture (SEVA). SEGA landing pads typically hosts two major genetic “control elements” that influence gene expression on the transcriptional (C1), and translational (C2) level. Furthermore, landing pads contain gadgets such as selection and counterselection markers.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.