SynBioHub

Public

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

Public

GFP report
BBa_E0240 Version 1 (Component)
GFP generator

Public

GFP genera
BBa_E0840 Version 1 (Component)
GFP generator

Public

BBa_K2066018
BBa_K2066018 Version 1 (Component)
UNS 2 Sequence, from Torella et al., 2013

Public

LuxR
BBa_I0462 Version 1 (Component)
luxR Protein Generator

Public

BBa_K517005
BBa_K517005 Version 1 (Component)
erg20-2

Public

BBa_J13002
BBa_J13002 Version 1 (Component)
TetR repressed POPS/RIPS generator

Public

BBa_K1448007
BBa_K1448007 Version 1 (Component)
ERG20-2 generator

Public

BBa_K081014
BBa_K081014 Version 1 (Component)
RFP protein generator - PoPS->RFP

Public

BBa_J52008
BBa_J52008 Version 1 (Component)
luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)

Public

BBa_K1448006
BBa_K1448006 Version 1 (Component)
ERG20-2 generator

Public

BBa_K1448005
BBa_K1448005 Version 1 (Component)
ERG20 generator

Public

BBa_I0466
BBa_I0466 Version 1 (Component)
RhlR Protein Generator

Public

BBa_K1462020
BBa_K1462020 Version 1 (Component)
Erg10

Public

BBa_K516022
BBa_K516022 Version 1 (Component)
AiiA protein generator TERM+ RBS+(B0032)

Public

BBa_K517004
BBa_K517004 Version 1 (Component)
ERG20

Public

BBa_I1466
BBa_I1466 Version 1 (Component)
RhlR protein generator (LVA-)

Public

BBa_K081012
BBa_K081012 Version 1 (Component)
GFP protein generator - PoPS->GFP

Public

SYFP2
BBa_K864100 Version 1 (Component)
Super Yellow Fluorescent Protein 2 (SYFP2)

Public

BBa_K1114107
BBa_K1114107 Version 1 (Component)
Bicistronic Design RBS 2, MoClo Format with BC fusion sites

Public

BBa_K145201
BBa_K145201 Version 1 (Component)
INPUT TetR generator

Public

BBa_M36709
BBa_M36709 Version 1 (Component)
Gemini Protein Generator

Public

BBa_J37019
BBa_J37019 Version 1 (Component)
AHL induced LuxR generator

Public

BBa_K1404008
BBa_K1404008 Version 1 (Component)
p70-CsgA-His*2, double His-tagged curli generator

Public

//classic/generator
classic_generator Version 1 (Collection)

Public

BBa_K081016
BBa_K081016 Version 1 (Component)
lasI protein generator - PoPS->lasI

Public

BBa_K081009
BBa_K081009 Version 1 (Component)
lasI protein generator (TERM-)

Public

BBa_K516030
BBa_K516030 Version 1 (Component)
mRFP protein generator TERM+ RBS+(B0030)

Public

BBa_K081008
BBa_K081008 Version 1 (Component)
luxI protein generator (TERM-)

Public

BBa_K117002
BBa_K117002 Version 1 (Component)
LsrA promoter (indirectly activated by AI-2)

Public

BBa_K1763442
BBa_K1763442 Version 1 (Component)
MaSp1/2[1:2]-12(1C3)

Public

BBa_K1763438
BBa_K1763438 Version 1 (Component)
MaSp1/2[2:1]-12(1C3)

Public

//classic/generator/plasmids
classic_generator_plasmids Version 1 (Collection)

Public

//classic/generator/prc
classic_generator_prc Version 1 (Collection)

Public

//classic/generator/rc
classic_generator_rc Version 1 (Collection)

Public

//classic/generator/prct
classic_generator_prct Version 1 (Collection)

Public

//classic/generator/uncategorized
classic_generator_uncategorized Version 1 (Collection)

Public

//classic/generator/rct
classic_generator_rct Version 1 (Collection)

Public

BBa_K1486020
BBa_K1486020 Version 1 (Component)
rLuc[2]

Public

TetR
BBa_I732084 Version 1 (Component)
Tet repressor generator (version1, TERM-)

Public

BBa_K1106007
BBa_K1106007 Version 1 (Component)
pulse generator part 2

Public

BBa_K079019
BBa_K079019 Version 1 (Component)
Lac 2 - operator library member

Public

BBa_K1202110
BBa_K1202110 Version 1 (Component)
AI-2 Generator (LuxS-Pfs)

Public

BBa_K313034
BBa_K313034 Version 1 (Component)
as RNA generator 2

Public

BBa_K1124110
BBa_K1124110 Version 1 (Component)
amilGFP(+LVA) generator(+RBS, +terminator)

Public

BBa_K1763439
BBa_K1763439 Version 1 (Component)
MaSp1/2[2:1]-12(T7)

Public

BBa_K1763443
BBa_K1763443 Version 1 (Component)
MaSp1/2[1:2]-12(T7)

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