BBa_K1606010BBa_K1606010 Version 1 (Component)Kumamax enzyme that gluten updated m-cherry reporter device
BBa_K395102BBa_K395102 Version 1 (Component)GFP reporter repressed by LuxR and 3OC6HSL (K395005:K121013)
BBa_K395103BBa_K395103 Version 1 (Component)GFP reporter repressed by LuxR and 3OC6HSL (K395006:K121013)
BBa_J58014BBa_J58014 Version 1 (Component)Promoter activated by OmpR-P with the reporter GFP
BBa_K1114500BBa_K1114500 Version 1 (Component)MoClo Level 1 RFP reporter with AE fusion sites
BBa_K812130BBa_K812130 Version 1 (Component)Citrine reporter with a Kozak sequence for expression in Xenopus
Pr+CFP-BBa_S03475 Version 1 (Component)Lambda-system Pr promoter with CFP(no degradation tag) reporter
BBa_J58015BBa_J58015 Version 1 (Component)Mutated promoter activated by OmpR-P with the reporter GFP
pCMV-ECFP-BBa_I763023 Version 1 (Component)LacI coding device with ECFP as a reporter regulated by pCMV
CMV + GFPBBa_K1852000 Version 1 (Component)GFP + CMV Promoter used for expression in oocyte cells. This part was planned to be used as a report
BBa_K1088052BBa_K1088052 Version 1 (Component)GFP reporter with flexible linker at N-terminus for creation of GFP fusions
BBa_I732091BBa_I732091 Version 1 (Component)Double Repoters (LacZ-alpha and GFP-AAV)
BBa_K079051BBa_K079051 Version 1 (Component)LacI repressor and GFP reporter proteins controlled by the J23118 promoter and Lac 1 operator
SEGASEGA_collection Version 1 (Collection)In the Standardized Genome Architecture (SEGA), genomic integration of DNA fragments is enabled by λ-Red recombineering and so-called landing pads that are a common concept in synthetic biology and typically contain features that i) enable insertion of additional genetic elements and ii) provide well-characterized functional parts such as promoters and genes, and iii) provides insulation against genome context-dependent effects. The SEGA landing pads allow for reusable homology regions and time-efficient construction of parallel genetic designs with a minimal number of reagents and handling steps. SEGA bricks, typically synthetic DNA or PCR fragments, are integrated on the genome simply by combining the two reagents (i.e. competent cells and DNA), followed by incubation steps, and successful recombinants are identified by visual inspection on agar plates. The design of the SEGA standard was heavily influenced by the Standard European Vector Architecture (SEVA). SEGA landing pads typically hosts two major genetic “control elements” that influence gene expression on the transcriptional (C1), and translational (C2) level. Furthermore, landing pads contain gadgets such as selection and counterselection markers.
BBa_K1778005BBa_K1778005 Version 1 (Component)eGFP:enhanced Green Fluorescent Protein. It???s the mutant of GFP. It is widely used as report gene
Intein_assisted_Bisection_MappingIntein_assisted_Bisection_Mapping_collection Version 1 (Collection)Split inteins are powerful tools for seamless ligation of synthetic split proteins. Yet, their use remains limited because the already intricate split site identification problem is often complicated by the requirement of extein junction sequences. To address this, we augmented a mini-Mu transposon-based screening approach and devised the intein-assisted bisection mapping (IBM) method. IBM robustly revealed clusters of split sites on five proteins, converting them into AND or NAND logic gates. We further showed that the use of inteins expands functional sequence space for splitting a protein. We also demonstrated the utility of our approach over rational inference of split sites from secondary structure alignment of homologous proteins. Furthermore, the intein inserted at an identified site could be engineered by the transposon again to become partially chemically inducible, and to some extent enabled post-translational tuning on host protein function. Our work offers a generalizable and systematic route towards creating split protein-intein fusions and conditional inteins for protein activity control.