Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_I13507
BBa_I13507 Version 1 (Component)
Screening plasmid intermediate

BBa_I13504
BBa_I13504 Version 1 (Component)
Screening plasmid intermediate

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

pSB1C3
pSB1C3 Version 1 (Component)
High copy BioBrick assembly plasmid

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

GFP report
BBa_E0240 Version 1 (Component)
GFP generator

YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

SEGA021
SEGA021 Version 1 (Component)
natural linear DNA.

SEGA022
SEGA022 Version 1 (Component)
natural linear DNA.

BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs

BBa_I13500
BBa_I13500 Version 1 (Component)
Screening plasmid intermediate

mRFP1
BBa_I13502 Version 1 (Component)
Screening plasmid intermediate

GFP genera
BBa_E0840 Version 1 (Component)
GFP generator

BBa_I13523
BBa_I13523 Version 1 (Component)
Screening plasmid v2

BBa_I13535
BBa_I13535 Version 1 (Component)
Test construct for screening plasmid

BBa_I13516
BBa_I13516 Version 1 (Component)
Screening Plasmid Intermediate

BBa_I13410
BBa_I13410 Version 1 (Component)
Screening Plasmid Test Construct v2

BBa_E0430
BBa_E0430 Version 1 (Component)
EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)

BBa_I13527
BBa_I13527 Version 1 (Component)
Screening plasmid v2 intermediate

BBa_I13506
BBa_I13506 Version 1 (Component)
Screening plasmid intermediate

PEST
BBa_J176018 Version 1 (Component)
PEST

BBa_I13528
BBa_I13528 Version 1 (Component)
Screening plasmid v1.0 intermediate

lacI
BBa_Q04121 Version 1 (Component)
QPI (B0034.C0012.B0015.R0011)

BBa_J09855
BBa_J09855 Version 1 (Component)
Constitutive luxR device with pLuxR

BBa_I13524
BBa_I13524 Version 1 (Component)
Screening plasmid v2 intermediate

BBa_I13525
BBa_I13525 Version 1 (Component)
Screening plasmid v2 intermediate

BBa_I13526
BBa_I13526 Version 1 (Component)
Screening plasmid v2 intermediate

BBa_K2066509
BBa_K2066509 Version 1 (Component)
sfGFP

EYFP
BBa_E0034 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

BBa_I13501
BBa_I13501 Version 1 (Component)
Screening plasmid intermediate

BBa_Q04510
BBa_Q04510 Version 1 (Component)
QPI (B0034.C0051.B0015.R0051)

Coupling
Coupling Version 1 (Component)
Translational coupler

BBa_K880005
BBa_K880005 Version 1 (Component)
Strong promoter, strong RBS combination for high expression levels of proteins

BBa_J33207
BBa_J33207 Version 1 (Component)
lac promoter and lacZ

BBa_I13023
BBa_I13023 Version 1 (Component)
QPI Test Construct Intermediate (Q01400.E0430)

BBa_K611085
BBa_K611085 Version 1 (Component)
BBa_C0051 test construct in GFP screening plasmid (BBa_K611082)

pLux/Tet
BBa_K176000 Version 1 (Component)
pLux/Tet Hybrid Promoter: (LuxR+,TetR-)->PoPS

BBa_B0034
BBa_B0034 Version 1 (Component)
RBS (Elowitz 1999) -- defines RBS efficiency