Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
pT7BBa_I719005 Version 1 (Component)T7 Promoter
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_I712074BBa_I712074 Version 1 (Component)T7 promoter (strong promoter from T7 bacteriophage)
//testtest Version 1 (Collection) BBa_K102071BBa_K102071 Version 1 (Component)TA7 gate in output test harness
pT7BBa_K525998 Version 1 (Component)Promoter T7 and RBS
BBa_K102031BBa_K102031 Version 1 (Component)TA1 gate in output test harness
BBa_K102081BBa_K102081 Version 1 (Component)TA8 gate in output test harness
BBa_K102021BBa_K102021 Version 1 (Component)TA0 gate in output test harness
BBa_K102091BBa_K102091 Version 1 (Component)TA9 gate in output test harness
BBa_K102051BBa_K102051 Version 1 (Component)TA3 gate in output test harness
BBa_K102061BBa_K102061 Version 1 (Component)TA6 gate in output test harness
BBa_K102041BBa_K102041 Version 1 (Component)TA2 gate in output test harness
BBa_K102131BBa_K102131 Version 1 (Component)TA13 gate in output test harness
BBa_K102101BBa_K102101 Version 1 (Component)TA10 gate in output test harness
BBa_K102111BBa_K102111 Version 1 (Component)TA11 gate in output test harness
BBa_K102141BBa_K102141 Version 1 (Component)TA14 gate in output test harness
BBa_K102121BBa_K102121 Version 1 (Component)TA12 gate in output test harness
//test1test1 Version 1 (Collection) BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_J04031BBa_J04031 Version 1 (Component)GFP w/LVA tag
PESTBBa_J176018 Version 1 (Component)PEST
BBa_B0016BBa_B0016 Version 1 (Component)Terminator (T7 RNAP specific, T_Phi)
BBa_K102011BBa_K102011 Version 1 (Component)TA0 anti-sense input in test harness
HABBa_I712008 Version 1 (Component)HA affinity tag
NLSBBa_J176008 Version 1 (Component)NLS
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
pLux/TetBBa_K176000 Version 1 (Component)pLux/Tet Hybrid Promoter: (LuxR+,TetR-)->PoPS
T7 RBSBBa_K1362090 Version 1 (Component)strong T7 RBS
linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K102092BBa_K102092 Version 1 (Component)TA9In anti-sense input in test harness
BBa_K102122BBa_K102122 Version 1 (Component)TA12In anti-sense input in test harness
BBa_K102052BBa_K102052 Version 1 (Component)TA3In anti-sense input in test harness
BBa_K102112BBa_K102112 Version 1 (Component)TA11In anti-sense input in test harness
BBa_K102034BBa_K102034 Version 1 (Component)TA1In anti-sense input in test harness
BBa_K102072BBa_K102072 Version 1 (Component)TA7In anti-sense input in test harness
BBa_K102082BBa_K102082 Version 1 (Component)TA8In anti-sense input in test harness
BBa_K102042BBa_K102042 Version 1 (Component)TA2In anti-sense input in test harness
BBa_K102102BBa_K102102 Version 1 (Component)TA10In anti-sense input in test harness
BBa_K102142BBa_K102142 Version 1 (Component)TA14In anti-sense input in test harness
BBa_K102132BBa_K102132 Version 1 (Component)TA13In anti-sense input in test harness
BBa_K102062BBa_K102062 Version 1 (Component)TA6In anti-sense input in test harness
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
NLSmycSTOPBBa_J176031 Version 1 (Component)NLS myc stop