SynBioHub

Public

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

crtI-AB
BBa_K349104 Version 1 (Component)
crtI-AB (BioBytes 2.0)

Public

crtY-AB
BBa_K349103 Version 1 (Component)
crtY-AB (BioBytes 2.0)

Public

crtE-AB
BBa_K349101 Version 1 (Component)
crtE-AB (BioBytes 2.0)

Public

crtB-AB
BBa_K349102 Version 1 (Component)
crtB-AB (BioBytes 2.0)

Public

BBa_K118003
BBa_K118003 Version 1 (Component)
crtI coding sequence encoding phytoene dehydrogenase

Public

BBa_K204091
BBa_K204091 Version 1 (Component)
plac+crtE+crtB+crtI+crtY

Public

BBa_K1485005
BBa_K1485005 Version 1 (Component)
crtY+crtZ+crtI

Public

vioA-AB
BBa_K349109 Version 1 (Component)
vioA-AB (BioBytes 2.0)

Public

kanA
BBa_K349115 Version 1 (Component)
kanR-AB (BioBytes 2.0)

Public

lacI-AB
BBa_K349107 Version 1 (Component)
lacI-AB (BioBytes 2.0)

Public

lambdaCI-A
BBa_K349108 Version 1 (Component)
lambdaCI-AB (BioBytes 2.0)

Public

chlorR-AB
BBa_K349118 Version 1 (Component)
chlorR-AB (BioBytes 2.0)

Public

CFP-AB
BBa_K349113 Version 1 (Component)
CFP-AB (BioBytes 2.0)

Public

BBa_K349119
BBa_K349119 Version 1 (Component)
mWasabi-AB (BioBytes 2.0)

Public

vioD-AB
BBa_K349111 Version 1 (Component)
vioD-AB (BioBytes 2.0)

Public

ampR-AB
BBa_K349116 Version 1 (Component)
ampR-AB (BioBytes 2.0)

Public

nRFP-AB
BBa_K349114 Version 1 (Component)
nRFP-AB (BioBytes 2.0)

Public

tetA
BBa_K349117 Version 1 (Component)
tetR-AB (BioBytes 2.0)

Public

tetrep-AB
BBa_K349106 Version 1 (Component)
tet_rep-AB (BioBytes 2.0)

Public

vioB-AB
BBa_K349110 Version 1 (Component)
vioB-AB (BioBytes 2.0)

Public

vioE-AB
BBa_K349112 Version 1 (Component)
vioE-AB (BioBytes 2.0)

Public

araC-AB
BBa_K349105 Version 1 (Component)
araC-AB (BioBytes 2.0)

Public

BBa_K118002
BBa_K118002 Version 1 (Component)
crtB coding sequence encoding phytoene synthase

Public

RFP-AB-Bfu
BBa_K349005 Version 1 (Component)
RFP-AB-BfuAI (for construction of AB BioBytes 2.0)

Public

KanR-AB-Bf
BBa_K349011 Version 1 (Component)
KanR-AB-BfuAI (for construction of AB BioBytes 2.0)

Public

RFP-AB-Bsa
BBa_K349001 Version 1 (Component)
RFP-AB-BsaI (for construction of AB BioBytes 2.0)

Public

KanR-AB-Bb
BBa_K349009 Version 1 (Component)
KanR-AB-BbsI (for construction of AB BioBytes 2.0)

Public

BBa_K204095
BBa_K204095 Version 1 (Component)
plac+crtE+crtB+crtZ

Public

BBa_K204096
BBa_K204096 Version 1 (Component)
ptet+crtE+crtB+crtZ

Public

BBa_J29015
BBa_J29015 Version 1 (Component)
arabinose induable CrtE CrtB CrtI generator

Public

BBa_K204065
BBa_K204065 Version 1 (Component)
crtI + crtY

Public

BBa_K1148003
BBa_K1148003 Version 1 (Component)
PhlbA CrtE + CrtB + Crt I

Public

RFP-BA-Bbs
BBa_K349003 Version 1 (Component)
RFP-BA-BbsI (for construction of BA BioBytes 2.0)

Public

rbs+crtZ
BBa_I742158 Version 1 (Component)
crtZ (beta-carotene hydroxylase) with native rbs

Public

BBa_I742151
BBa_I742151 Version 1 (Component)
crtE (geranylgeranyl pyrophosphate synthase) coding sequence.

Public

BBa_K1485003
BBa_K1485003 Version 1 (Component)
crtE+crtB

Public

BBa_K1485004
BBa_K1485004 Version 1 (Component)
crtY+crtZ

Public

BBa_K118005
BBa_K118005 Version 1 (Component)
rbs+crtI (phytoene dehydrogenase)

Public

BBa_K118009
BBa_K118009 Version 1 (Component)
crtB (phytoene synthase) + crtI (phytoene dehydrogenase)

Public

BBa_J29002
BBa_J29002 Version 1 (Component)
CrtI

Public

BBa_K204064
BBa_K204064 Version 1 (Component)
crtE + crtB

Public

kanB
BBa_K349301 Version 1 (Component)
kanR-BA (BioBytes 2.0)

Public

ampR-BA
BBa_K349302 Version 1 (Component)
ampR-BA (BioBytes 2.0)

Public

tetR-BA
BBa_K349303 Version 1 (Component)
tetR-BA (BioBytes 2.0)

Public

BBa_I742156
BBa_I742156 Version 1 (Component)
crtZ native rbs

Public

BBa_K539119
BBa_K539119 Version 1 (Component)
crtY (lycopene cyclase)

Public

BBa_K204076
BBa_K204076 Version 1 (Component)
plac+crtE+crtB

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