ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
Truncated Sequence PullTruncated Version 1 (Activity)Used to indicate that a sequence was truncated after pulling from the source and before submission
GC Optimised Sequence PullGC_Optimised Version 1 (Activity)Used to indicate that a sequence was GC optimised after pulling from the source and before submission
"M"BBa_K1080004 Version 1 (Component)ChlM
M-BBBa_K774001 Version 1 (Component)Mammalian-Bacterial Promoter: E9-ns2 CArG promoter sequence + BHN + BBaK216005
B-MBBa_K774000 Version 1 (Component)Bacterial-Mammalian Promoter: BBaK216005 + BHN + CArG promoter sequence E9-ns2
BBa_K1582035BBa_K1582035 Version 1 (Component)Linker+inJanus-m
BBa_K1582036BBa_K1582036 Version 1 (Component)Linker+sJanus-m
BBa_J52000BBa_J52000 Version 1 (Component)This is the part which robin has created
yorGBO_29975 Version 1 (Component) YorGBO_2208 Version 1 (Component) BBa_J24687BBa_J24687 Version 1 (Component)8 M RBS - TetR
BBa_J24684BBa_J24684 Version 1 (Component)5. M RBS - LacI
BBa_K1548000BBa_K1548000 Version 1 (Component)Hsp60 promoter (M. bovis)
BBa_J24718BBa_J24718 Version 1 (Component)38. pLacI=M RBS=AraC=M RBS=TetR=Strong RBS=mCherry(+LVA)=terminator
BBa_J52003BBa_J52003 Version 1 (Component)Robins composite part
BBa_J050041BBa_J050041 Version 1 (Component)Robins Part from Turkey
BBa_K1051304BBa_K1051304 Version 1 (Component)cln3 promoter (M phase to G1 phase)
BBa_J58002BBa_J58002 Version 1 (Component)Robins Part for test purposes
BBa_K1606029BBa_K1606029 Version 1 (Component)Gluten Updated m-cherry reporter gene
BBa_J24706BBa_J24706 Version 1 (Component)26. M RBS-TetR-S RBS-mCherry(+LVA)-terminator
BBa_J24712BBa_J24712 Version 1 (Component)32. M RBS - LacI - S RBS - EYFP(+LVA) - terminator
BBa_K189019BBa_K189019 Version 1 (Component)M of lambda genome
BBa_J24709BBa_J24709 Version 1 (Component)29. M RBS - TetR - S RBS - ECFP (+LVA) - terminator
BBa_K1014006BBa_K1014006 Version 1 (Component)HrpS Protein Generator(M)
BBa_M45155BBa_M45155 Version 1 (Component)M. tuberculosis antigen
BBa_M45152BBa_M45152 Version 1 (Component)M. tuberculosis antigen
BBa_M45154BBa_M45154 Version 1 (Component)M. tuberculosis antigen
BBa_K1137002BBa_K1137002 Version 1 (Component)M. Smegmatis FdxA
BBa_K1137001BBa_K1137001 Version 1 (Component)M. Smegmatis FprA
BBa_K1137000BBa_K1137000 Version 1 (Component)M. Smegmatis SirA