SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Scar 25
BBa_B0105 Version 1 (Component)
RFC 25 Scar Sequence

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

Scar25 ATG
BBa_K1319106 Version 1 (Component)
RFC 25 Translation Start Scar Sequence

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_K1321339
BBa_K1321339 Version 1 (Component)
CBDcenA+Linker, RFC 25 standard

SEGA021
SEGA021 Version 1 (Component)
natural linear DNA.

SEGA022
SEGA022 Version 1 (Component)
natural linear DNA.

BBa_K1321005
BBa_K1321005 Version 1 (Component)
Synthetic Phytochelatin EC(20) RFC[25]

linker
BBa_K365005 Version 1 (Component)
20 aa linker RFC-25 (fusion standard Freiburg)

BBa_K1321009
BBa_K1321009 Version 1 (Component)
Nickel Binding Protein (NiBP) Freiburg format (RFC[25])

BBa_K1321337
BBa_K1321337 Version 1 (Component)
sfGFP in Freiburg format (RFC 25)

BBa_K1051000
BBa_K1051000 Version 1 (Component)
Stop codon free RFP in RFC[23] standard

BBa_K1051003
BBa_K1051003 Version 1 (Component)
Stop codon free GFP in RFC[23] standard

RFC 37
BBa_K245009 Version 1 (Component)
RFC 37 Scar Sequence

mCherry
BBa_J06504 Version 1 (Component)
monomeric RFP optimized for bacteria

BBa_K1321011
BBa_K1321011 Version 1 (Component)
SmtA metallothionein in Freiburg format (RFC[25])

linker
BBa_K133132 Version 1 (Component)
8 aa protein domain linker

BBa_K648013
BBa_K648013 Version 1 (Component)
GFP with Standard 25 Prefix/Suffix

BBa_K105012
BBa_K105012 Version 1 (Component)
10 aa flexible protein domain linker

linker
BBa_K157009 Version 1 (Component)
Split fluorophore linker; Freiburg standard

BBa_K1321012
BBa_K1321012 Version 1 (Component)
fMT metallothionein in Freiburg format (RFC[25])

cI lam
BBa_R1051 Version 1 (Component)
Promoter, Standard (lambda cI regulated)<br>

BBa_K1321351
BBa_K1321351 Version 1 (Component)
CBDcenA with linker fused to NiBP in Freiburg format (RFC 25)

His
BBa_K157011 Version 1 (Component)
His affinity tag; Freiburg standard

BBa_K157012
BBa_K157012 Version 1 (Component)
Strep affinity tag II; Freiburg standard

BBa_K1051004
BBa_K1051004 Version 1 (Component)
Stop codon free mOrange in RFC[23] standard

BBa_K208014
BBa_K208014 Version 1 (Component)
GFP (Silver Fusion)/Double Terminator

BBa_K648005
BBa_K648005 Version 1 (Component)
Short Fusion Protein Linker: GGSG with standard 25 prefix/suffix

RBS-RFP
BBa_K093005 Version 1 (Component)
RFP with RBS

BBa_K1321347
BBa_K1321347 Version 1 (Component)
dCBD with N-terminal linker in RFC 25

BBa_K648007
BBa_K648007 Version 1 (Component)
Medium 6AA Fusion Protein Linker: GGSGGS with Standard 25 Prefix/Suffix

BBa_K1051002
BBa_K1051002 Version 1 (Component)
Stop codon free EYFP in RFC[23] standard

BBa_K1321348
BBa_K1321348 Version 1 (Component)
sfGFP fused to dCBD with linker in RFC 25

linker
BBa_K157013 Version 1 (Component)
15 aa flexible glycine-serine protein domain linker; Freiburg standard

BBa_K1321345
BBa_K1321345 Version 1 (Component)
NiBP fused to dCBD with linker in RFC 25

BBa_K648011
BBa_K648011 Version 1 (Component)
Standard 25-Ready Xyle Reporter

BBa_I757011
BBa_I757011 Version 1 (Component)
bla_frag1(aa 26-199) Fusion Part

BBa_K1051001
BBa_K1051001 Version 1 (Component)
Stop codon free ECFP in RFC[23] standard

AA
BBa_K1362465 Version 1 (Component)
Double A (2x the nucleotide Adenine)

BBa_K1159993
BBa_K1159993 Version 1 (Component)
25/25 Assembly Scar

BBa_K081014
BBa_K081014 Version 1 (Component)
RFP protein generator - PoPS->RFP

BBa_K1462502
BBa_K1462502 Version 1 (Component)
PDZ domain + Linker

BBa_K1351012
BBa_K1351012 Version 1 (Component)
spaS Subtilin (antimicrobial peptide, Freiburg standard)

BBa_K1150013
BBa_K1150013 Version 1 (Component)
AGS Linker

BBa_K1321342
BBa_K1321342 Version 1 (Component)
sfGFP fused to CBDcex in RFC 25

BBa_I15010
BBa_I15010 Version 1 (Component)
cph8 (Cph1/EnvZ fusion)

BBa_K1462503
BBa_K1462503 Version 1 (Component)
SH3 domain + Linker

BBa_K1462501
BBa_K1462501 Version 1 (Component)
GBD domian + Linker