Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K156030BBa_K156030 Version 1 (Component)Genetic attenuator measurement device (template)
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
spacerBBa_B0040 Version 1 (Component)Spacer.1 (generic)
BBa_F1610BBa_F1610 Version 1 (Component)3OC<sub>6</sub>HSL Sender Device
BBa_F2622BBa_F2622 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
BBa_K398331BBa_K398331 Version 1 (Component)pCaiF-B0032 measurement device
BBa_I763026BBa_I763026 Version 1 (Component)LacI coding device regulated by pTetR
BBa_F2621BBa_F2621 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
BBa_I20260BBa_I20260 Version 1 (Component)Measurement Kit Test of J23101
BBa_K156028BBa_K156028 Version 1 (Component)Genetic attenuator (synthetic transciption terminator) ~45% efficient
BBa_K156029BBa_K156029 Version 1 (Component)Genetic attenuator (synthetic transcription terminator) ~17% efficient
BBa_K156027BBa_K156027 Version 1 (Component)Genetic attenuator (synthetic transcription terminator) ~68% efficient
BBa_K1956017BBa_K1956017 Version 1 (Component)Noise in Device measurement
BBa_K112808BBa_K112808 Version 1 (Component)Enterobacteria phage T4 Lysis Device - no promoter
BBa_I0460BBa_I0460 Version 1 (Component)aiiA Device (B0034.C0060.B0015)
BBa_K1956015BBa_K1956015 Version 1 (Component)Noise in Device measurement
BBa_K1956014BBa_K1956014 Version 1 (Component)Noise in Device measurement
BBa_K1956018BBa_K1956018 Version 1 (Component)Noise in Device measurement
BBa_K233317BBa_K233317 Version 1 (Component)rfp measurement device
BBa_K819007BBa_K819007 Version 1 (Component)Measurement device for Luminesensor
BBa_K1956022BBa_K1956022 Version 1 (Component)Noise in Device measurement
BBa_K1956023BBa_K1956023 Version 1 (Component)Noise in Device measurement
BBa_K1126004BBa_K1126004 Version 1 (Component)Fusion3m2 attenuator
BBa_K1100037BBa_K1100037 Version 1 (Component)Trp attenuator
BBa_K1126003BBa_K1126003 Version 1 (Component)pT181 attenuator
BBa_K1126005BBa_K1126005 Version 1 (Component)Fusion1 attenuator
BBa_K313031BBa_K313031 Version 1 (Component)asRNA measurement device 1
BBa_K313032BBa_K313032 Version 1 (Component)asRNA measurement device 2
BBa_K1799025BBa_K1799025 Version 1 (Component)Trp attenuator + stop codon
BBa_K173002BBa_K173002 Version 1 (Component)J23118 measurement system
BBa_K528001BBa_K528001 Version 1 (Component)RBS measurement device J23100 B0032 mORANGE
BBa_K528009BBa_K528009 Version 1 (Component)RBS measurement device J23100 B0033 YFP
BBa_K528002BBa_K528002 Version 1 (Component)RBS measurement device J23100 B0034 mORANGE
BBa_K528000BBa_K528000 Version 1 (Component)RBS measurement device J23100 B0031 mORANGE
BBa_K528005BBa_K528005 Version 1 (Component)RBS measurement device J23100 B0033 RFP
BBa_K528006BBa_K528006 Version 1 (Component)RBS measurement device J23100 B0034 RFP
BBa_K528003BBa_K528003 Version 1 (Component)RBS measurement device J23100 B0031 RFP
BBa_K528004BBa_K528004 Version 1 (Component)RBS measurement device J23100 B0032 RFP
BBa_K528010BBa_K528010 Version 1 (Component)RBS measurement device J23100 B0034 YFP