SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
ATGATG Version 1 (Component) SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
BBa_K1166002BBa_K1166002 Version 1 (Component)HlyA-tag+Secretion system
BBa_K554002BBa_K554002 Version 1 (Component)HlyA secretion signal peptide
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_J04031BBa_J04031 Version 1 (Component)GFP w/LVA tag
BBa_K416003BBa_K416003 Version 1 (Component)Yeast Secretion Tag
BBa_K2018023BBa_K2018023 Version 1 (Component)hlyA secretion tag
HABBa_I712008 Version 1 (Component)HA affinity tag
NLSBBa_J176008 Version 1 (Component)NLS
BBa_K223030BBa_K223030 Version 1 (Component)RBS + TolC+ HlyR + HlyC + HlyB + HlyD
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
BBa_K223029BBa_K223029 Version 1 (Component)HlyR + HlyC + HlyB + HlyD + TT
PESTBBa_J176018 Version 1 (Component)PEST
BBa_K223034BBa_K223034 Version 1 (Component)trp-operon + RBS + TolC+ HlyR + HlyC + HlyB + HlyD + TT (Trp-sensitive HlyA exporter)
BBa_K223031BBa_K223031 Version 1 (Component)RBS + TolC+ HlyR + HlyC + HlyB + HlyD + TT
linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_K1344008BBa_K1344008 Version 1 (Component)TolC-HlyB-HlyD Canal for Hemolysin-tag Secretion
BBa_M1528BBa_M1528 Version 1 (Component)RBS + HlyB + RBS + HlyD
NLSmycSTOPBBa_J176031 Version 1 (Component)NLS myc stop
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K223025BBa_K223025 Version 1 (Component)HlyR + HlyC + Hly B + Hly D
BBa_K215001BBa_K215001 Version 1 (Component)Secretion Signal and Streptavidin Binding Tags
BBa_K1810001BBa_K1810001 Version 1 (Component)Repeating QSP Chain with HlyA secretion Tag
G-His6(N)BBa_K1362430 Version 1 (Component)C-terminal His6 (N-Intein)
RBS-GFP-TeBBa_I763020 Version 1 (Component)RBS-GFP (+LVA Tag)-Terminators
BBa_K2018030BBa_K2018030 Version 1 (Component)Secretion system
MFa1-SecreBBa_K792002 Version 1 (Component)Secretion tag from yeast α-factor mating pheromone (MFα1)
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
BBa_K496003BBa_K496003 Version 1 (Component)RBS + SlrP secretion tag, salmonella T3 sec. sys.
polyABBa_J176009 Version 1 (Component)polyA2
SicP-SptPBBa_J64008 Version 1 (Component)SicP-SptP chaperone-secretion tag pair from Salmonella type III secretion system
BBa_M1008BBa_M1008 Version 1 (Component)HlyA secretion signal with stop codon
DioxyBBa_K1688022 Version 1 (Component)Catechol 1,2 Dioxygenase + HlyA export tag
BBa_J70044BBa_J70044 Version 1 (Component)6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA
His6BBa_K1362431 Version 1 (Component)N-terminal His6 (C-Intein)
BBa_M1004BBa_M1004 Version 1 (Component)HlyD Membrane Protein
BBa_K390501BBa_K390501 Version 1 (Component)LacPromoter/RBS/PhaP/HlyA/Terminator
BBa_M1027BBa_M1027 Version 1 (Component)RBS HlyB RBS HlyD RBS TolC Term
BBa_K1688005BBa_K1688005 Version 1 (Component)dTomato and ModLac with HlyA tag (inc RBS, NahR/Psal promoter system)
BBa_M1006BBa_M1006 Version 1 (Component)Promoter, RBS, HlyB, RBS, HlyD, Term
BBa_K1365120BBa_K1365120 Version 1 (Component)anti Pseudomonas aeruginosa secreting system
BBa_J04051BBa_J04051 Version 1 (Component)RFP with tag
ModLacBBa_K1688020 Version 1 (Component)ModLac laccase with His-tag and HlyA export tag
BBa_K208003BBa_K208003 Version 1 (Component)OmpA Signal Peptide - Silver Fusion Compatible